PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
51-100 / 86044 show all
anovak-vgSNPtv*hetalt
0.0000
14.4661
0.0000
0.0000
126745000
anovak-vgSNPtv*homalt
99.0679
98.8237
99.3132
19.4559
372687443637134125681960
76.3240
astatham-gatkINDEL***
99.3424
99.2404
99.4446
59.9126
341925261734178819091550
81.1943
astatham-gatkINDEL**het
99.5127
99.4973
99.5281
60.7701
193157976192779914573
62.6915
astatham-gatkINDEL**hetalt
96.8001
94.0563
99.7088
58.1664
237371500239687069
98.5714
astatham-gatkINDEL**homalt
99.5755
99.8874
99.2657
58.8575
125031141125041925908
98.1622
astatham-gatkINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5**
0.0000
90.0000
0.0000
0.0000
91000
astatham-gatkINDELC1_5*het
0.0000
88.8889
0.0000
0.0000
81000
astatham-gatkINDELC1_5*hetalt
0.0000
100.0000
0.0000
0.0000
10000
astatham-gatkINDELC1_5*homalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC6_15**
0.0000
100.0000
0.0000
0.0000
70000
astatham-gatkINDELC6_15*het
0.0000
100.0000
0.0000
0.0000
70000
astatham-gatkINDELC6_15*hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC6_15*homalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELD16_PLUS**
97.8775
98.0100
97.7454
70.7802
66491356633153104
67.9739
astatham-gatkINDELD16_PLUS*het
97.7337
99.3036
96.2126
78.4600
313722289611470
61.4035
astatham-gatkINDELD16_PLUS*hetalt
96.8051
94.4128
99.3217
38.8807
182510820501414
100.0000
astatham-gatkINDELD16_PLUS*homalt
99.1187
99.7045
98.5397
70.8497
1687516872520
80.0000
astatham-gatkINDELD1_5**
99.5682
99.4433
99.6934
60.4898
145928817145983449317
70.6013
astatham-gatkINDELD1_5*het
99.6974
99.6803
99.7145
58.9760
8729428087301250122
48.8000
astatham-gatkINDELD1_5*hetalt
97.2343
95.0220
99.5520
63.2355
973551097784443
97.7273
astatham-gatkINDELD1_5*homalt
99.8143
99.9448
99.6841
62.4034
488992748904155152
98.0645
astatham-gatkINDELD6_15**
98.2985
98.0875
98.5103
54.9898
2559349925592387347
89.6641
astatham-gatkINDELD6_15*het
98.7915
99.4048
98.1857
62.8008
115236911473212175
82.5472
astatham-gatkINDELD6_15*hetalt
97.1014
94.8251
99.4898
33.5762
775142378004039
97.5000
astatham-gatkINDELD6_15*homalt
98.8889
99.8893
97.9083
55.4989
631976319135133
98.5185
astatham-gatkINDELI16_PLUS**
97.4870
96.7226
98.2635
70.9237
6168209616810984
77.0642
astatham-gatkINDELI16_PLUS*het
98.4446
98.1604
98.7304
75.7581
26685026443411
32.3529
astatham-gatkINDELI16_PLUS*hetalt
96.0726
92.6597
99.7466
58.1637
1944154196855
100.0000
astatham-gatkINDELI16_PLUS*homalt
97.6467
99.6797
95.6950
72.0858
1556515567068
97.1429
astatham-gatkINDELI1_5**
99.4616
99.2520
99.6722
58.6147
1495371127149586492402
81.7073
astatham-gatkINDELI1_5*het
99.5857
99.4610
99.7107
60.4880
7861542678596228141
61.8421
astatham-gatkINDELI1_5*hetalt
97.1674
94.5243
99.9624
62.1019
105826131064544
100.0000
astatham-gatkINDELI1_5*homalt
99.7125
99.8544
99.5710
55.1217
603408860345260257
98.8462
astatham-gatkINDELI6_15**
97.8089
97.1035
98.5247
52.8353
2410471924109361337
93.3518
astatham-gatkINDELI6_15*het
98.9793
98.7242
99.2358
59.2368
990512898697654
71.0526
astatham-gatkINDELI6_15*hetalt
96.4480
93.1938
99.9376
38.5683
7969582801055
100.0000
astatham-gatkINDELI6_15*homalt
97.7332
99.8557
95.6989
54.9107
623096230280278
99.2857
astatham-gatkSNP***
99.5934
99.2091
99.9807
19.0428
3030461241583030315584162
27.7397
astatham-gatkSNP**het
99.3521
98.7393
99.9725
20.1637
184996723620184984550895
18.7008
astatham-gatkSNP**hetalt
99.7699
99.5408
100.0000
40.6164
867486700
astatham-gatkSNP**homalt
99.9742
99.9548
99.9936
17.1971
117962753411796037667
88.1579
astatham-gatkSNPti**
99.6161
99.2515
99.9833
17.5605
2069900156112069836345101
29.2754
astatham-gatkSNPti*het
99.3889
98.8086
99.9762
18.5890
126661815273126656330260
19.8675
astatham-gatkSNPti*hetalt
99.8279
99.6564
100.0000
39.9586
580258000
astatham-gatkSNPti*homalt
99.9764
99.9582
99.9946
15.8604
8027023368026934341
95.3488