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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 182 183 184 185 186 187 188 189 190 ... 1720 1721 » 9251-9300 / 86044 show all
cchapple-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	88.3721	0.0000	0.0000	76	10	0	0	0
cchapple-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	92.5926	100.0000	86.2069	89.1386	25	0	25	4	3	75.0000
cchapple-custom	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	94.0259	90.8384	97.4454	47.9934	3619	365	3700	97	76	78.3505
cchapple-custom	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	95.0342	91.9149	98.3726	47.9336	1296	114	2962	49	35	71.4286
cchapple-custom	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	86.7728	0.0000	0.0000	1581	241	0	0	0
cchapple-custom	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	96.2224	98.6702	93.8931	48.2213	742	10	738	48	41	85.4167
cchapple-custom	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	92.5568	89.9466	95.3230	44.4415	3534	395	3954	194	181	93.2990
cchapple-custom	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	93.9285	91.4672	96.5260	44.7581	879	82	3362	121	110	90.9091
cchapple-custom	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	87.1090	0.0000	0.0000	2061	305	0	0	0
cchapple-custom	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	93.5988	98.6711	89.0226	42.7218	594	8	592	73	71	97.2603
cchapple-custom	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	93.6192	89.9522	97.5980	66.0369	752	84	772	19	15	78.9474
cchapple-custom	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	94.8610	91.4980	98.4807	64.9564	226	21	713	11	8	72.7273
cchapple-custom	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	88.1132	0.0000	0.0000	467	63	0	0	0
cchapple-custom	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	93.6508	100.0000	88.0597	74.5247	59	0	59	8	7	87.5000
cchapple-custom	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	99.1597	98.9715	99.3486	67.2313	4715	49	4728	31	4	12.9032
cchapple-custom	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	98.8587	98.7069	99.0109	72.0332	2977	39	3003	30	3	10.0000
cchapple-custom	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.6843	99.4279	99.9421	53.0723	1738	10	1725	1	1	100.0000
cchapple-custom	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	99.3846	99.2919	99.4776	66.9410	3225	23	3237	17	3	17.6471
cchapple-custom	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	99.2140	99.2589	99.1691	72.0797	2009	15	2029	17	3	17.6471
cchapple-custom	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.6721	99.3464	100.0000	51.9682	1216	8	1208	0	0
cchapple-custom	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	94.1384	90.5537	98.0186	60.1764	1668	174	1682	34	29	85.2941
cchapple-custom	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	95.8425	93.0514	98.8062	60.2346	616	46	1407	17	12	70.5882
cchapple-custom	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	86.1761	0.0000	0.0000	773	124	0	0	0
cchapple-custom	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	96.3319	98.5866	94.1781	59.8901	279	4	275	17	17	100.0000
cchapple-custom	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	92.5741	90.8365	94.3795	65.5301	1933	195	2099	125	115	92.0000
cchapple-custom	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	93.4668	92.7820	94.1618	66.2439	617	48	1629	101	95	94.0594
cchapple-custom	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	86.6667	0.0000	0.0000	845	130	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	95.8241	96.5164	95.1417	62.7732	471	17	470	24	20	83.3333
jlack-gatk	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	91.4681	90.2214	92.7497	68.5930	9088	985	8942	699	645	92.2747
jlack-gatk	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	92.4559	95.1485	89.9115	78.4139	3844	196	3556	399	354	88.7218
jlack-gatk	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	89.0056	80.5701	99.4139	40.3057	3081	743	3223	19	17	89.4737
jlack-gatk	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	92.9723	97.9176	88.5025	64.8041	2163	46	2163	281	274	97.5089
jlack-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	91.3416	88.0522	94.8864	61.9636	3508	476	3507	189	176	93.1217
jlack-gatk	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	94.4592	94.7518	94.1685	74.3063	1336	74	1308	81	70	86.4198
jlack-gatk	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	88.0509	79.0340	99.3902	32.6949	1440	382	1467	9	8	88.8889
jlack-gatk	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	92.4826	97.3404	88.0866	60.7649	732	20	732	99	98	98.9899

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