PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Challenge Closed
View Responses
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Reset
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
9101-9150 / 86044 show all
ciseli-customINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
36.4192
29.7932
46.8354
63.9946
6341494629714663
92.8571
ciseli-customINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
42.6022
32.6316
61.3466
68.7695
217448246155138
89.0323
ciseli-customINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
3.0769
0.0000
0.0000
30945000
ciseli-customINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
53.7560
79.3033
40.6582
61.4881
387101383559525
93.9177
ciseli-customINDELD1_5lowcmp_AllRepeats_51to200bp_gt95identity_merged*
46.1795
45.3564
47.0329
65.4087
18072177181520441056
51.6634
ciseli-customINDELD1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
60.3870
78.8652
48.9241
68.3622
111229812051258386
30.6836
ciseli-customINDELD1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
4.7201
0.0000
0.0000
861736000
ciseli-customINDELD1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
56.7644
80.9840
43.6963
58.5880
609143610786670
85.2417
ciseli-customINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_merged*
35.0447
30.4403
41.2903
53.1797
11962733121617291499
86.6975
ciseli-customINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
60.0456
65.5567
55.3892
58.1977
630331740596423
70.9732
ciseli-customINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
3.8039
0.0000
0.0000
902276000
ciseli-customINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
43.0574
79.0698
29.5836
47.9961
47612647611331076
94.9691
ciseli-customINDELC6_15lowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
29.4118
97.1808
005120
0.0000
ciseli-customINDELC6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
75.0000
97.7401
00310
0.0000
ciseli-customINDELC6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELC6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
15.3846
96.9484
002110
0.0000
cchapple-customSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_merged*
98.6758
98.2850
99.0698
67.8831
1490261491141
7.1429
cchapple-customSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
98.1287
97.5806
98.6829
71.9841
96824974130
0.0000
cchapple-customSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
99.7125
99.6183
99.8069
55.4600
522251711
100.0000
ciseli-customSNP*lowcmp_AllRepeats_51to200bp_gt95identity_merged*
76.2286
96.1797
63.1327
74.0117
458218246152695108
4.0074
ciseli-customSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
69.5898
94.9602
54.9176
73.3767
28641522898237940
1.6814
ciseli-customSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
87.5000
00020
0.0000
ciseli-customSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
90.8951
98.2838
84.5396
75.5036
171830171731468
21.6561
ciseli-customINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_merged*
48.8684
40.9881
60.5000
69.8341
7551087726474272
57.3840
ciseli-customINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
69.7634
77.7946
63.2353
72.2165
515147516300115
38.3333
ciseli-customINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
3.1215
0.0000
0.0000
28869000
ciseli-customINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
63.2216
74.9117
54.6875
63.1124
21271210174157
90.2299
ciseli-customINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_merged*
17.7637
11.1244
44.0594
77.0193
9374389113102
90.2655
ciseli-customINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
32.7016
22.2672
61.5385
82.5000
55192563529
82.8571
ciseli-customINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.9434
0.0000
0.0000
5525000
ciseli-customINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
38.8235
55.9322
29.7297
69.0808
3326337873
93.5897
ciseli-customSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_merged*
70.5551
95.3826
55.9831
73.4742
1446701455114427
2.3601
ciseli-customSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
63.5187
93.8508
48.0041
71.9172
9316193810168
0.7874
ciseli-customSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
87.5000
00020
0.0000
ciseli-customSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
88.4490
98.2824
80.4044
77.2309
515951712619
15.0794
ckim-dragenINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_merged*
94.1784
93.5471
94.8182
69.0265
94236509259506472
93.2806
ckim-dragenINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
96.7279
96.7327
96.7231
79.7872
3908132360112295
77.8689
ckim-dragenINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
92.8661
87.0293
99.5422
40.0515
332849634791616
100.0000
ckim-dragenINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
91.7876
99.0041
85.5516
65.0041
2187222179368361
98.0978
ckim-dragenINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ckim-dragenINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ckim-dragenINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-dragenINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ciseli-customSNPtilowcmp_AllRepeats_51to200bp_gt95identity_merged*
79.1047
96.5517
66.9981
74.4486
31361123167156081
5.1923
ciseli-customSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
72.9289
95.5040
58.9859
74.2486
1933911966136732
2.3409
ciseli-customSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
71.4286
00020
0.0000
ciseli-customSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
91.8911
98.2843
86.2787
74.9189
120321120119149
25.6545
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
18.1984
12.1359
36.3636
91.4286
25181244224
57.1429
ciseli-customINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
28.8000
20.0000
51.4286
92.7835
197618173
17.6471