PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
86001-86044 / 86044 show all
ghariani-varprowlSNPtvtech_badpromoters*
96.5986
98.6111
94.6667
59.4595
7117141
25.0000
jli-customINDELD6_15tech_badpromoters*
96.9697
94.1176
100.0000
51.5152
1611600
jpowers-varprowlINDELD1_5tech_badpromotershet
70.0000
87.5000
58.3333
47.8261
71755
100.0000
rpoplin-dv42INDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
ghariani-varprowlSNPtvtech_badpromotershet
95.6522
100.0000
91.6667
63.2653
3303331
33.3333
jli-customINDELD6_15tech_badpromotershet
94.7368
90.0000
100.0000
52.6316
91900
jpowers-varprowlINDELD1_5tech_badpromotershetalt
0.0000
0.0000
0.0000
02000
rpoplin-dv42INDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
jli-customINDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
10100
jpowers-varprowlINDELD1_5tech_badpromotershomalt
80.0000
66.6667
100.0000
40.0000
63600
rpoplin-dv42INDELD16_PLUStech_badpromotershomalt
0.0000
100.0000
00000
ghariani-varprowlSNPtvtech_badpromotershomalt
97.4359
97.4359
97.4359
55.1724
3813810
0.0000
jli-customINDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
53.8462
60600
ndellapenna-hhgaINDELI6_15tech_badpromoters*
100.0000
100.0000
100.0000
59.3750
1301300
cchapple-customSNPtvtech_badpromoters*
96.5228
97.2222
95.8333
57.6471
7026931
33.3333
ciseli-customINDELC6_15tech_badpromoters*
0.0000
0.0000
0.0000
00000
ciseli-customINDELI16_PLUStech_badpromoters*
40.0000
25.0000
100.0000
80.0000
13100
gduggal-bwafbSNPtitech_badpromoters*
99.4152
100.0000
98.8372
52.4862
8508510
0.0000
gduggal-snapfbINDELI16_PLUStech_badpromoters*
0.0000
0.0000
0.0000
04000
gduggal-snapplatINDELI16_PLUStech_badpromoters*
0.0000
0.0000
0.0000
04000
gduggal-snapvardINDELI16_PLUStech_badpromoters*
0.0000
0.0000
100.0000
50.0000
04100
ghariani-varprowlINDELC6_15tech_badpromoters*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15tech_badpromoters*
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELI6_15tech_badpromotershet
100.0000
100.0000
100.0000
58.8235
70700
cchapple-customSNPtvtech_badpromotershet
95.5224
96.9697
94.1176
64.2105
3213220
0.0000
ciseli-customINDELC6_15tech_badpromotershet
0.0000
0.0000
0.0000
00000
ciseli-customINDELI16_PLUStech_badpromotershet
0.0000
100.0000
02000
gduggal-bwafbSNPtitech_badpromotershet
98.8764
100.0000
97.7778
57.1429
4404410
0.0000
gduggal-snapfbINDELI16_PLUStech_badpromotershet
0.0000
0.0000
0.0000
02000
gduggal-snapplatINDELI16_PLUStech_badpromotershet
0.0000
0.0000
0.0000
02000
gduggal-snapvardINDELI16_PLUStech_badpromotershet
0.0000
0.0000
100.0000
50.0000
02100
ghariani-varprowlINDELC6_15tech_badpromotershet
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15tech_badpromotershet
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELI6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
30300
cchapple-customSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELI16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbSNPtitech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELI16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELI16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000