PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
85951-86000 / 86044 show all
jlack-gatkINDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtvtech_badpromotershomalt
93.1507
87.1795
100.0000
36.5385
3453300
astatham-gatkINDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
ltrigg-rtg1INDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
56.6667
1301300
astatham-gatkSNPtitech_badpromotershomalt
98.7952
100.0000
97.6190
41.6667
4104111
100.0000
asubramanian-gatkINDELC1_5tech_badpromotershomalt
0.0000
100.0000
00000
asubramanian-gatkINDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
53.8462
60600
asubramanian-gatkSNP*tech_badpromotershomalt
98.1366
98.7500
97.5309
46.7105
7917922
100.0000
bgallagher-sentieonINDELC16_PLUStech_badpromotershomalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
43.7500
90900
bgallagher-sentieonINDELI6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
62.5000
30300
cchapple-customINDEL*tech_badpromotershomalt
100.0000
100.0000
100.0000
57.1429
3303300
cchapple-customINDELD16_PLUStech_badpromotershomalt
0.0000
100.0000
00000
cchapple-customINDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
58.6207
1301200
qzeng-customINDELI6_15tech_badpromotershomalt
66.6667
66.6667
66.6667
57.1429
21211
100.0000
egarrison-hhgaINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
gduggal-bwaplatSNPtitech_badpromotershomalt
94.8718
90.2439
100.0000
44.7761
3743700
hfeng-pmm3INDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNP*tech_badpromoters*
98.7421
100.0000
97.5155
54.2614
157015740
0.0000
ndellapenna-hhgaINDEL*tech_badpromoters*
97.3333
96.0526
98.6486
91.8051
7337311
100.0000
eyeh-varpipeSNPtvtech_badpromoters*
78.6517
100.0000
64.8148
71.8750
72070380
0.0000
gduggal-bwafbINDELC6_15tech_badpromoters*
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDELI16_PLUStech_badpromoters*
85.7143
75.0000
100.0000
40.0000
31300
gduggal-bwavardINDELI16_PLUStech_badpromoters*
75.0000
75.0000
75.0000
75.0000
31311
100.0000
jmaeng-gatkINDELC16_PLUStech_badpromoters*
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNP*tech_badpromotershet
97.4684
100.0000
95.0617
59.0909
7707740
0.0000
ndellapenna-hhgaINDEL*tech_badpromotershet
97.4359
97.4359
97.4359
49.3506
3813811
100.0000
eyeh-varpipeSNPtvtech_badpromotershet
63.4615
100.0000
46.4789
76.6447
33033380
0.0000
gduggal-bwafbINDELC6_15tech_badpromotershet
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDELI16_PLUStech_badpromotershet
66.6667
50.0000
100.0000
0.0000
11100
gduggal-bwavardINDELI16_PLUStech_badpromotershet
80.0000
100.0000
66.6667
78.5714
20211
100.0000
jmaeng-gatkINDELC16_PLUStech_badpromotershet
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDEL*tech_badpromotershetalt
85.7143
75.0000
100.0000
57.1429
31300
eyeh-varpipeSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDELI16_PLUStech_badpromotershetalt
0.0000
100.0000
00000
gduggal-bwavardINDELI16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNP*tech_badpromotershomalt
100.0000
100.0000
100.0000
48.0519
8008000
ndellapenna-hhgaINDEL*tech_badpromotershomalt
98.4615
96.9697
100.0000
60.4938
3213200
eyeh-varpipeSNPtvtech_badpromotershomalt
100.0000
100.0000
100.0000
53.7500
3903700
gduggal-bwafbINDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
33.3333
20200
gduggal-bwavardINDELI16_PLUStech_badpromotershomalt
66.6667
50.0000
100.0000
50.0000
11100
jmaeng-gatkINDELC16_PLUStech_badpromotershomalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD1_5tech_badpromoters*
70.2703
68.4211
72.2222
45.4545
1361355
100.0000
rpoplin-dv42INDELD16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
33.3333
40400