PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
85851-85900 / 86044 show all
gduggal-snapplatINDELC1_5tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC1_5tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbSNPtvtech_badpromoters*
90.4459
98.6111
83.5294
68.8645
71171141
7.1429
gduggal-snapfbSNPtvtech_badpromotershet
85.3333
96.9697
76.1905
70.4225
32132100
0.0000
gduggal-snapfbSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbSNPtvtech_badpromotershomalt
95.1220
100.0000
90.6977
67.1756
3903941
25.0000
gduggal-snapplatINDELC16_PLUStech_badpromoters*
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC16_PLUStech_badpromotershet
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC16_PLUStech_badpromotershomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELD6_15tech_badpromoters*
90.3226
82.3529
100.0000
54.8387
1431400
hfeng-pmm1INDELD6_15tech_badpromotershet
82.3529
70.0000
100.0000
58.8235
73700
hfeng-pmm1INDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
10100
hfeng-pmm1INDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
53.8462
60600
hfeng-pmm2INDEL*tech_badpromoters*
97.9866
96.0526
100.0000
52.9032
7337300
hfeng-pmm2INDEL*tech_badpromotershet
96.0000
92.3077
100.0000
51.3514
3633600
hfeng-pmm2INDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
hfeng-pmm2INDEL*tech_badpromotershomalt
100.0000
100.0000
100.0000
54.7945
3303300
hfeng-pmm1SNPtvtech_badpromoters*
99.3007
98.6111
100.0000
49.6454
7117100
hfeng-pmm1SNPtvtech_badpromotershet
98.4615
96.9697
100.0000
40.7407
3213200
hfeng-pmm1SNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1SNPtvtech_badpromotershomalt
100.0000
100.0000
100.0000
55.1724
3903900
hfeng-pmm1INDELI16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
73.3333
40400
hfeng-pmm1INDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
75.0000
20200
hfeng-pmm1INDELI16_PLUStech_badpromotershetalt
0.0000
100.0000
00000
hfeng-pmm1INDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
hfeng-pmm1SNP*tech_badpromoters*
99.3590
98.7261
100.0000
46.3668
155215500
hfeng-pmm1SNP*tech_badpromotershet
98.6842
97.4026
100.0000
42.7481
7527500
hfeng-pmm1SNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1SNP*tech_badpromotershomalt
100.0000
100.0000
100.0000
49.3671
8008000
hfeng-pmm1SNPtitech_badpromoters*
99.4083
98.8235
100.0000
43.2432
8418400
hfeng-pmm1SNPtitech_badpromotershet
98.8506
97.7273
100.0000
44.1558
4314300
hfeng-pmm1SNPtitech_badpromotershetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1SNPtitech_badpromotershomalt
100.0000
100.0000
100.0000
42.2535
4104100
hfeng-pmm1INDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
53.1915
2202200
hfeng-pmm1INDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
38.4615
80800
hfeng-pmm1INDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
10100
hfeng-pmm1INDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
59.3750
1301300
hfeng-pmm1INDELI6_15tech_badpromoters*
100.0000
100.0000
100.0000
53.5714
1301300
hfeng-pmm1INDELI6_15tech_badpromotershet
100.0000
100.0000
100.0000
53.3333
70700
hfeng-pmm1INDELI6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
30300
hfeng-pmm1INDELI6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
57.1429
30300
ghariani-varprowlINDELC6_15tech_badpromoters*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15tech_badpromotershet
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDEL*tech_badpromoters*
78.6667
77.6316
79.7297
67.6856
5917591515
100.0000
ghariani-varprowlINDEL*tech_badpromotershet
81.3187
94.8718
71.1538
54.3860
372371515
100.0000
ghariani-varprowlINDEL*tech_badpromotershetalt
0.0000
0.0000
0.0000
04000
ghariani-varprowlINDEL*tech_badpromotershomalt
80.0000
66.6667
100.0000
58.4906
22112200