PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
82501-82550 / 86044 show all
mlin-fermikitSNP*segdup*
98.0230
97.4311
98.6220
85.8156
2734672127340382136
35.6021
mlin-fermikitSNP*segduphet
97.6489
96.6622
98.6560
85.6660
16739578167362281
0.4386
mlin-fermikitSNP*segduphetalt
100.0000
100.0000
100.0000
92.8571
70700
mlin-fermikitSNP*segduphomalt
98.6182
98.6689
98.5676
86.0366
1060014310597154135
87.6623
mlin-fermikitSNPtisegdup*
98.0976
97.5329
98.6689
85.0585
190554821905125786
33.4630
mlin-fermikitSNPtisegduphet
97.7090
96.7914
98.6442
84.9489
11644386116411600
0.0000
mlin-fermikitSNPtisegduphetalt
100.0000
100.0000
100.0000
96.7213
20200
mlin-fermikitSNPtisegduphomalt
98.7142
98.7209
98.7075
85.2139
74099674089786
88.6598
mlin-fermikitSNP*segdupwithalt*
0.0000
100.0000
00000
mlin-fermikitSNP*segdupwithalthet
0.0000
100.0000
00000
mlin-fermikitSNP*segdupwithalthetalt
0.0000
100.0000
00000
mlin-fermikitSNP*segdupwithalthomalt
0.0000
100.0000
00000
mlin-fermikitSNPtisegdupwithalt*
0.0000
100.0000
00000
mlin-fermikitSNPtisegdupwithalthet
0.0000
100.0000
00000
mlin-fermikitSNPtisegdupwithalthetalt
0.0000
100.0000
00000
mlin-fermikitSNPtisegdupwithalthomalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELC16_PLUSsegdupwithalt*
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC16_PLUSsegdupwithalthet
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC16_PLUSsegdupwithalthetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC16_PLUSsegdupwithalthomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELI6_15segdupwithalt*
0.0000
100.0000
00000
mlin-fermikitINDELI6_15segdupwithalthet
0.0000
100.0000
00000
mlin-fermikitINDELI6_15segdupwithalthetalt
0.0000
100.0000
00000
mlin-fermikitINDELI6_15segdupwithalthomalt
0.0000
100.0000
00000
ndellapenna-hhgaINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9993
10100
ndellapenna-hhgaINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9951
10100
ndellapenna-hhgaINDEL*segdupwithalthetalt
0.0000
100.0000
00000
ndellapenna-hhgaINDEL*segdupwithalthomalt
0.0000
100.0000
00000
mlin-fermikitINDELI1_5segdupwithalt*
0.0000
100.0000
00000
mlin-fermikitINDELI1_5segdupwithalthet
0.0000
100.0000
00000
mlin-fermikitINDELI1_5segdupwithalthetalt
0.0000
100.0000
00000
mlin-fermikitINDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELC1_5segdupwithalt*
0.0000
100.0000
00000
ndellapenna-hhgaINDELC1_5segdupwithalthet
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC1_5segdupwithalthetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC1_5segdupwithalthomalt
0.0000
100.0000
00000
mlin-fermikitSNPtvsegdupwithalt*
0.0000
100.0000
00000
mlin-fermikitSNPtvsegdupwithalthet
0.0000
100.0000
00000
mlin-fermikitSNPtvsegdupwithalthetalt
0.0000
100.0000
00000
mlin-fermikitSNPtvsegdupwithalthomalt
0.0000
100.0000
00000
qzeng-customINDELD16_PLUSsegdupwithalt*
0.0000
100.0000
00000
qzeng-customINDELD16_PLUSsegdupwithalthet
0.0000
100.0000
00000
qzeng-customINDELD16_PLUSsegdupwithalthetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtisegdupwithalt*
0.0000
100.0000
00000
ndellapenna-hhgaSNPtisegdupwithalthet
0.0000
100.0000
00000
ndellapenna-hhgaSNPtisegdupwithalthetalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtisegdupwithalthomalt
0.0000
100.0000
00000
qzeng-customINDELC6_15segdupwithalt*
0.0000
100.0000
00000
qzeng-customINDELC6_15segdupwithalthet
0.0000
100.0000
00000