PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
82401-82450 / 86044 show all
raldana-dualsentieonSNP*segdup*
99.5928
99.7934
99.3931
89.8391
28009582800317110
5.8480
raldana-dualsentieonSNP*segduphet
99.4013
99.7344
99.0704
90.7424
1727146172651621
0.6173
raldana-dualsentieonSNP*segduphetalt
100.0000
100.0000
100.0000
96.2766
70700
raldana-dualsentieonSNP*segduphomalt
99.9022
99.8883
99.9162
87.9114
10731121073199
100.0000
rpoplin-dv42SNP*segdup*
99.7488
99.7506
99.7470
89.9398
2799770279917131
43.6620
rpoplin-dv42SNP*segduphet
99.7082
99.6651
99.7514
90.3344
172595817253433
6.9767
rpoplin-dv42SNP*segduphetalt
100.0000
100.0000
100.0000
98.3834
70700
rpoplin-dv42SNP*segduphomalt
99.8140
99.8883
99.7398
89.1939
1073112107312828
100.0000
rpoplin-dv42SNPtvsegdup*
99.6835
99.6835
99.6834
91.0590
85052785012712
44.4444
rpoplin-dv42SNPtvsegduphet
99.6497
99.5839
99.7157
91.3241
5265225261150
0.0000
rpoplin-dv42SNPtvsegduphetalt
100.0000
100.0000
100.0000
98.3834
70700
rpoplin-dv42SNPtvsegduphomalt
99.7378
99.8456
99.6302
90.4939
3233532331212
100.0000
rpoplin-dv42INDELI1_5segdup*
98.8177
98.5836
99.0530
94.2377
1044151046109
90.0000
rpoplin-dv42INDELI1_5segduphet
98.7928
98.6989
98.8868
94.8759
531753365
83.3333
rpoplin-dv42INDELI1_5segduphetalt
95.6522
91.6667
100.0000
96.7407
4444400
rpoplin-dv42INDELI1_5segduphomalt
99.1543
99.1543
99.1543
92.6746
469446944
100.0000
rpoplin-dv42INDELI6_15segdup*
98.2659
97.1429
99.4152
91.3984
170517011
100.0000
rpoplin-dv42INDELI6_15segduphet
98.1818
97.5904
98.7805
92.4632
8128111
100.0000
rpoplin-dv42INDELI6_15segduphetalt
98.8764
97.7778
100.0000
89.4231
4414400
rpoplin-dv42INDELI6_15segduphomalt
97.8261
95.7447
100.0000
90.7025
4524500
rpoplin-dv42INDELI16_PLUSsegdup*
97.8723
97.8723
97.8723
91.6961
4614611
100.0000
rpoplin-dv42INDELI16_PLUSsegduphet
97.9592
100.0000
96.0000
91.6667
2402411
100.0000
rpoplin-dv42INDELI16_PLUSsegduphetalt
100.0000
100.0000
100.0000
95.7895
40400
rpoplin-dv42INDELI16_PLUSsegduphomalt
97.2973
94.7368
100.0000
89.4737
1811800
rpoplin-dv42INDELD16_PLUSsegdup*
94.8276
94.8276
94.8276
93.6819
5535533
100.0000
rpoplin-dv42INDELD16_PLUSsegduphet
96.1039
100.0000
92.5000
93.3775
3703733
100.0000
rpoplin-dv42INDELD16_PLUSsegduphetalt
80.0000
66.6667
100.0000
93.4783
63600
rpoplin-dv42INDELD16_PLUSsegduphomalt
100.0000
100.0000
100.0000
94.5946
1201200
rpoplin-dv42SNPtisegdup*
99.7773
99.7799
99.7748
89.3733
1949443194924419
43.1818
rpoplin-dv42SNPtisegduphet
99.7339
99.7007
99.7671
89.8249
119943611992283
10.7143
rpoplin-dv42SNPtisegduphetalt
100.0000
100.0000
100.0000
99.2857
20200
rpoplin-dv42SNPtisegduphomalt
99.8469
99.9067
99.7871
88.5156
7498774981616
100.0000
rpoplin-dv42INDELD1_5segdup*
99.4999
99.1840
99.8179
94.3988
10949109622
100.0000
rpoplin-dv42INDELD1_5segduphet
99.4935
99.2775
99.7106
94.2248
687568922
100.0000
rpoplin-dv42INDELD1_5segduphetalt
98.0392
96.1538
100.0000
95.9645
5025000
rpoplin-dv42INDELD1_5segduphomalt
99.7207
99.4429
100.0000
94.4210
357235700
rpoplin-dv42INDELD6_15segdup*
96.2963
95.2880
97.3262
92.9726
182918255
100.0000
rpoplin-dv42INDELD6_15segduphet
95.6989
96.7391
94.6809
94.0881
8938955
100.0000
rpoplin-dv42INDELD6_15segduphetalt
94.6237
89.7959
100.0000
90.1786
4454400
rpoplin-dv42INDELD6_15segduphomalt
98.9899
98.0000
100.0000
92.1348
4914900
rpoplin-dv42INDELC6_15segdup*
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15segduphet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15segduphetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15segduphomalt
0.0000
100.0000
00000
raldana-dualsentieonINDELC1_5segdup*
0.0000
0.0000
0.0000
00000
raldana-dualsentieonINDELC1_5segduphet
0.0000
0.0000
0.0000
00000
raldana-dualsentieonINDELC1_5segduphetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonINDELC1_5segduphomalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonINDELC6_15segdup*
0.0000
0.0000
0.0000
00000
raldana-dualsentieonINDELC6_15segduphet
0.0000
0.0000
0.0000
00000