PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
81901-81950 / 86044 show all
asubramanian-gatkINDELI1_5segdup*
98.7667
98.2059
99.3340
95.0336
104019104472
28.5714
asubramanian-gatkINDELI1_5segduphet
98.4123
97.7695
99.0637
96.0327
5261252950
0.0000
asubramanian-gatkINDELI1_5segduphetalt
96.7742
93.7500
100.0000
96.1889
4534600
asubramanian-gatkINDELI1_5segduphomalt
99.3644
99.1543
99.5754
92.7483
469446922
100.0000
anovak-vgINDELC1_5segdup*
0.0000
0.0000
60.0000
99.0619
00320
0.0000
anovak-vgINDELC1_5segduphet
0.0000
0.0000
60.0000
98.8610
00320
0.0000
anovak-vgINDELC1_5segduphetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC1_5segduphomalt
0.0000
100.0000
00000
anovak-vgINDELD1_5segdup*
91.5860
90.4805
92.7189
94.7590
99810510067952
65.8228
anovak-vgINDELD1_5segduphet
93.3306
94.0751
92.5978
95.1126
651416635334
64.1509
anovak-vgINDELD1_5segduphetalt
0.0000
17.3077
0.0000
0.0000
943000
anovak-vgINDELD1_5segduphomalt
93.5483
94.1504
92.9539
93.9028
338213432618
69.2308
anovak-vgINDELC16_PLUSsegdup*
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSsegduphet
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSsegduphetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSsegduphomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSsegdup*
76.0605
68.9655
84.7826
91.5129
40183974
57.1429
anovak-vgINDELD16_PLUSsegduphet
82.8571
78.3784
87.8788
91.3613
2982943
75.0000
anovak-vgINDELD16_PLUSsegduphetalt
0.0000
0.0000
0.0000
09000
anovak-vgINDELD16_PLUSsegduphomalt
83.6502
91.6667
76.9231
91.8750
1111031
33.3333
anovak-vgINDEL*segdup*
73.2929
72.4961
74.1075
94.2874
18537031889660536
81.2121
anovak-vgINDEL*segduphet
72.6201
63.5061
84.7882
95.6374
93153598117691
51.7045
anovak-vgINDEL*segduphetalt
0.0000
21.5385
0.0000
0.0000
28102000
anovak-vgINDEL*segduphomalt
76.7205
93.1250
65.2299
92.3073
89466908484445
91.9421
anovak-vgINDELD6_15segdup*
70.1754
62.8272
79.4702
93.2348
120711203123
74.1935
anovak-vgINDELD6_15segduphet
75.5396
76.0870
75.0000
93.8242
7022782620
76.9231
anovak-vgINDELD6_15segduphetalt
0.0000
18.3673
0.0000
0.0000
940000
anovak-vgINDELD6_15segduphomalt
85.5227
82.0000
89.3617
91.4234
4194253
60.0000
anovak-vgINDELC6_15segdup*
0.0000
100.0000
00000
anovak-vgINDELC6_15segduphet
0.0000
100.0000
00000
anovak-vgINDELC6_15segduphetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC6_15segduphomalt
0.0000
100.0000
00000
astatham-gatkINDEL*segdup*
98.7115
98.8654
98.5581
94.6872
25272925293710
27.0270
astatham-gatkINDEL*segduphet
98.4019
98.7040
98.1017
95.1947
1447191447282
7.1429
astatham-gatkINDEL*segduphetalt
96.8254
93.8462
100.0000
94.7122
122812400
astatham-gatkINDEL*segduphomalt
99.4292
99.7917
99.0693
93.6623
958295898
88.8889
anovak-vgSNP*segdup*
97.8173
97.8231
97.8116
92.2860
2745661127219609236
38.7521
anovak-vgSNP*segduphet
97.2290
97.3206
97.1375
93.7111
1685346416696492128
26.0163
anovak-vgSNP*segduphetalt
0.0000
14.2857
0.0000
0.0000
16000
anovak-vgSNP*segduphomalt
98.7938
98.6875
98.9004
87.8317
1060214110523117108
92.3077
anovak-vgINDELI6_15segdup*
45.2111
40.5714
51.0490
89.3838
71104737055
78.5714
anovak-vgINDELI6_15segduphet
38.0775
28.9157
55.7377
91.0688
2459342713
48.1481
anovak-vgINDELI6_15segduphetalt
0.0000
20.0000
0.0000
0.0000
936000
anovak-vgINDELI6_15segduphomalt
59.8909
80.8511
47.5610
87.6506
389394342
97.6744
anovak-vgSNPtvsegdup*
97.7325
97.6676
97.7974
93.3295
8333199830318780
42.7807
anovak-vgSNPtvsegduphet
97.1722
97.0305
97.3143
94.5962
5130157510914142
29.7872
anovak-vgSNPtvsegduphetalt
0.0000
14.2857
0.0000
0.0000
16000
anovak-vgSNPtvsegduphomalt
98.7340
98.8882
98.5802
89.2441
32023631944638
82.6087
anovak-vgINDELI16_PLUSsegdup*
48.3031
38.2979
65.3846
88.6463
18291795
55.5556
anovak-vgINDELI16_PLUSsegduphet
34.4828
20.8333
100.0000
91.2281
519500