PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
80751-80800 / 86044 show all
gduggal-snapvardINDELC1_5segduphetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC1_5segduphomalt
0.0000
0.0000
100.0000
98.4301
001000
gduggal-snapvardINDELC6_15segdup*
0.0000
0.0000
30.7692
97.7113
00493
33.3333
gduggal-snapvardINDELC6_15segduphet
0.0000
0.0000
25.0000
97.6285
00393
33.3333
gduggal-snapvardINDELC6_15segduphetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC6_15segduphomalt
0.0000
0.0000
100.0000
98.3871
00100
gduggal-snapvardINDELD6_15segdup*
67.8956
65.9686
69.9387
92.8194
126651144938
77.5510
gduggal-snapvardINDELD6_15segduphet
71.7253
78.2609
66.1972
93.2445
7220944837
77.0833
gduggal-snapvardINDELD6_15segduphetalt
0.0000
55.1020
0.0000
0.0000
2722000
gduggal-snapvardINDELD6_15segduphomalt
68.9215
54.0000
95.2381
87.5000
27232011
100.0000
gduggal-snapvardINDELC16_PLUSsegdup*
0.0000
0.0000
50.0000
93.7500
00110
0.0000
gduggal-snapvardINDELC16_PLUSsegduphet
0.0000
0.0000
50.0000
93.1034
00110
0.0000
gduggal-snapvardINDELC16_PLUSsegduphetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC16_PLUSsegduphomalt
0.0000
100.0000
00000
gduggal-snapvardINDELI1_5segdup*
91.3324
90.4627
92.2190
95.0889
9581019608168
83.9506
gduggal-snapvardINDELI1_5segduphet
92.0218
96.8401
87.6603
96.3583
521175477764
83.1169
gduggal-snapvardINDELI1_5segduphetalt
0.0000
39.5833
0.0000
0.0000
1929000
gduggal-snapvardINDELI1_5segduphomalt
93.4028
88.3721
99.0408
89.7341
4185541344
100.0000
gduggal-snapvardINDELD1_5segdup*
90.1625
92.8377
87.6372
94.9594
1024791198169138
81.6568
gduggal-snapvardINDELD1_5segduphet
90.8046
97.6879
84.8276
95.5414
67616861154123
79.8701
gduggal-snapvardINDELD1_5segduphetalt
0.0000
71.1538
0.0000
0.0000
3715000
gduggal-snapvardINDELD1_5segduphomalt
90.9566
86.6295
95.7386
91.9173
311483371515
100.0000
gduggal-snapvardSNPtvsegdup*
97.9096
97.0933
98.7396
94.2289
8284248822610533
31.4286
gduggal-snapvardSNPtvsegduphet
97.6892
96.9926
98.3958
95.3896
512815950918312
14.4578
gduggal-snapvardSNPtvsegduphetalt
0.0000
0.0000
0.0000
07000
gduggal-snapvardSNPtvsegduphomalt
98.3768
97.4676
99.3031
90.1749
31568231352221
95.4545
gduggal-snapvardSNP*segdup*
98.2794
97.3955
99.1795
93.1728
273367312707622472
32.1429
gduggal-snapvardSNP*segduphet
98.1316
97.2975
98.9803
94.4886
168494681669517222
12.7907
gduggal-snapvardSNP*segduphetalt
0.0000
0.0000
0.0000
07000
gduggal-snapvardSNP*segduphomalt
98.5503
97.6171
99.5016
88.8814
10487256103815250
96.1538
gduggal-snapvardSNPtisegdup*
98.3714
97.5175
99.2403
92.6560
190524851894114546
31.7241
gduggal-snapvardSNPtisegduphet
98.2336
97.4314
99.0491
94.0407
117213091166611214
12.5000
gduggal-snapvardSNPtisegduphetalt
0.0000
0.0000
0.0000
02000
gduggal-snapvardSNPtisegduphomalt
98.6062
97.6815
99.5484
88.2591
733117472753332
96.9697
ghariani-varprowlINDELC1_5segdup*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC1_5segduphet
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC1_5segduphetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC1_5segduphomalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15segdup*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15segduphet
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15segduphetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15segduphomalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDEL*segdup*
89.4068
90.3756
88.4586
97.2748
23102462307301223
74.0864
ghariani-varprowlINDEL*segduphet
90.4926
98.3629
83.7885
96.1254
1442241442279206
73.8351
ghariani-varprowlINDEL*segduphetalt
0.0000
1.5385
0.0000
0.0000
2128000
ghariani-varprowlINDEL*segduphomalt
93.7217
90.2083
97.5197
91.8211
866948652217
77.2727
ghariani-varprowlINDELC16_PLUSsegdup*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSsegduphet
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSsegduphetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSsegduphomalt
0.0000
0.0000
0.0000
00000