PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
80651-80700 / 86044 show all
ghariani-varprowlINDELI6_15map_sirenhetalt
0.0000
1.3889
0.0000
0.0000
171000
ghariani-varprowlINDELI6_15map_sirenhomalt
81.7610
72.2222
94.2029
76.1246
65256543
75.0000
ghariani-varprowlINDELD6_15map_siren*
75.5337
73.4774
77.7083
86.7293
37413537310794
87.8505
ghariani-varprowlINDELD6_15map_sirenhet
83.2073
98.2143
72.1785
87.9583
275527510694
88.6792
ghariani-varprowlINDELD6_15map_sirenhetalt
0.0000
1.0101
0.0000
0.0000
198000
ghariani-varprowlINDELD6_15map_sirenhomalt
85.5895
75.3846
98.9899
78.1457
98329810
0.0000
ghariani-varprowlINDELD1_5map_siren*
93.0194
95.1544
90.9781
84.3263
33581713358333117
35.1351
ghariani-varprowlINDELD1_5map_sirenhet
93.3499
99.2534
88.1092
86.6204
2260172260305111
36.3934
ghariani-varprowlINDELD1_5map_sirenhetalt
0.0000
0.0000
0.0000
084000
ghariani-varprowlINDELD1_5map_sirenhomalt
95.7280
94.0068
97.5133
74.2805
1098701098286
21.4286
ghariani-varprowlINDELI1_5map_siren*
92.4494
93.3444
91.5714
83.4764
28052002803258121
46.8992
ghariani-varprowlINDELI1_5map_sirenhet
93.1801
98.4533
88.4430
87.0613
1655261653216106
49.0741
ghariani-varprowlINDELI1_5map_sirenhetalt
0.0000
0.0000
0.0000
0112000
ghariani-varprowlINDELI1_5map_sirenhomalt
95.6739
94.8845
96.4765
70.7843
11506211504215
35.7143
ghariani-varprowlINDELD16_PLUSmap_siren*
63.0655
62.9371
63.1944
94.7137
9053915338
71.6981
ghariani-varprowlINDELD16_PLUSmap_sirenhet
72.0679
93.5897
58.5938
93.8343
735755338
71.6981
ghariani-varprowlINDELD16_PLUSmap_sirenhetalt
0.0000
3.2258
0.0000
0.0000
130000
ghariani-varprowlINDELD16_PLUSmap_sirenhomalt
64.0000
47.0588
100.0000
97.5309
16181600
ghariani-varprowlSNP*map_siren*
98.7774
99.3373
98.2237
61.6367
1452599691452632627430
16.3685
ghariani-varprowlSNP*map_sirenhet
98.3861
99.3911
97.4013
64.9618
90437554904402413303
12.5570
ghariani-varprowlSNP*map_sirenhetalt
0.0000
0.0000
0.0000
081000
ghariani-varprowlSNP*map_sirenhomalt
99.5027
99.3944
99.6112
54.3239
5482233454823214127
59.3458
ghariani-varprowlINDELI16_PLUSmap_siren*
59.4937
54.6512
65.2778
81.5385
4739472524
96.0000
ghariani-varprowlINDELI16_PLUSmap_sirenhet
73.0435
85.7143
63.6364
80.1205
427422423
95.8333
ghariani-varprowlINDELI16_PLUSmap_sirenhetalt
0.0000
0.0000
0.0000
016000
ghariani-varprowlINDELI16_PLUSmap_sirenhomalt
37.0370
23.8095
83.3333
89.6552
516511
100.0000
gduggal-snapplatINDEL*map_siren*
79.6077
71.8219
89.2868
89.6136
53222088570968578
11.3869
gduggal-snapplatINDEL*map_sirenhet
79.1743
73.0923
86.3603
90.4763
32951213355256154
9.6257
gduggal-snapplatINDEL*map_sirenhetalt
28.1292
17.4089
73.2143
97.8495
4320441158
53.3333
gduggal-snapplatINDEL*map_sirenhomalt
83.6919
74.7269
95.1011
85.8909
1984671211610916
14.6789
gduggal-snapfbSNPtvmap_siren*
98.2058
98.6697
97.7461
64.5313
45319611453201045278
26.6029
gduggal-snapfbSNPtvmap_sirenhet
97.7974
98.9374
96.6834
63.5849
2830530428306971266
27.3944
gduggal-snapfbSNPtvmap_sirenhetalt
96.3415
97.5309
95.1807
83.3333
7927940
0.0000
gduggal-snapfbSNPtvmap_sirenhomalt
98.9049
98.2309
99.5884
65.8705
16935305169357012
17.1429
gduggal-snapplatINDELD16_PLUSmap_siren*
0.0000
0.0000
0.0000
0143000
gduggal-snapplatINDELD16_PLUSmap_sirenhet
0.0000
0.0000
0.0000
078000
gduggal-snapplatINDELD16_PLUSmap_sirenhetalt
0.0000
0.0000
0.0000
031000
gduggal-snapplatINDELD16_PLUSmap_sirenhomalt
0.0000
0.0000
0.0000
034000
gduggal-snapplatINDELD1_5map_siren*
85.8913
80.9294
91.5013
89.0859
2856673327330456
18.4211
gduggal-snapplatINDELD1_5map_sirenhet
85.7607
82.4769
89.3168
89.6940
1878399215725842
16.2791
gduggal-snapplatINDELD1_5map_sirenhetalt
34.1880
23.8095
60.6061
98.0287
206420137
53.8462
gduggal-snapplatINDELD1_5map_sirenhomalt
88.9159
82.0205
97.0771
85.2746
9582101096337
21.2121
gduggal-snapplatINDELD6_15map_siren*
43.1110
29.0766
83.3333
91.7593
148361105213
14.2857
gduggal-snapplatINDELD6_15map_sirenhet
45.1091
32.1429
75.6098
90.5093
9019062202
10.0000
gduggal-snapplatINDELD6_15map_sirenhetalt
21.6216
12.1212
100.0000
96.0265
12871200
gduggal-snapplatINDELD6_15map_sirenhomalt
51.8357
35.3846
96.8750
91.1846
46843111
100.0000
gduggal-snapplatINDELC1_5map_siren*
0.0000
100.0000
00000
gduggal-snapplatINDELC1_5map_sirenhet
0.0000
100.0000
00000
gduggal-snapplatINDELC1_5map_sirenhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC1_5map_sirenhomalt
0.0000
100.0000
00000