PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
80201-80250 / 86044 show all
ndellapenna-hhgaINDELC16_PLUSmap_siren*
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC16_PLUSmap_sirenhet
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC16_PLUSmap_sirenhetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC16_PLUSmap_sirenhomalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC1_5map_siren*
0.0000
100.0000
00000
ndellapenna-hhgaINDELC1_5map_sirenhet
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELC1_5map_sirenhetalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELC1_5map_sirenhomalt
0.0000
100.0000
00000
ndellapenna-hhgaINDEL*map_siren*
97.7903
97.6113
97.9700
96.5183
7233177723915078
52.0000
ndellapenna-hhgaINDEL*map_sirenhet
97.8580
98.1145
97.6028
80.6313
442385443810950
45.8716
ndellapenna-hhgaINDEL*map_sirenhetalt
85.8846
78.1377
95.3368
88.2532
1935418495
55.5556
ndellapenna-hhgaINDEL*map_sirenhomalt
98.6802
98.5687
98.7920
79.0989
26173826173223
71.8750
mlin-fermikitINDELI1_5map_siren*
83.5106
74.6755
94.7168
75.2199
22447612241125111
88.8000
mlin-fermikitINDELI1_5map_sirenhet
82.5666
72.2784
96.2698
75.1037
121546612134736
76.5957
mlin-fermikitINDELI1_5map_sirenhetalt
82.7225
70.5357
100.0000
83.1169
79337800
mlin-fermikitINDELI1_5map_sirenhomalt
84.8214
78.3828
92.4125
74.4596
9502629507875
96.1538
mlin-fermikitSNP*map_siren*
83.3638
74.6157
94.4357
47.0930
1091093711910909464285503
85.6098
mlin-fermikitSNP*map_sirenhet
82.6394
70.9993
98.8447
48.1176
64603263886459575518
2.3841
mlin-fermikitSNP*map_sirenhetalt
72.4409
56.7901
100.0000
65.9259
46354600
mlin-fermikitSNP*map_sirenhomalt
84.4526
80.6077
88.6825
45.6664
44460106964445356735485
96.6861
mlin-fermikitSNPtimap_siren*
84.2869
75.7361
95.0143
45.5372
76005243507600139883501
87.7884
mlin-fermikitSNPtimap_sirenhet
83.4382
72.0464
99.1091
46.3223
44944174384494440415
3.7129
mlin-fermikitSNPtimap_sirenhetalt
71.9101
56.1404
100.0000
66.6667
32253200
mlin-fermikitSNPtimap_sirenhomalt
85.5625
81.8362
89.6443
44.4398
3102968873102535843486
97.2656
mlin-fermikitSNPtvmap_siren*
81.3085
72.1446
93.1393
50.3116
33136127943312524402002
82.0492
mlin-fermikitSNPtvmap_sirenhet
80.8694
68.7161
98.2452
51.7745
196598950196513513
0.8547
mlin-fermikitSNPtvmap_sirenhetalt
72.4409
56.7901
100.0000
65.9259
46354600
mlin-fermikitSNPtvmap_sirenhomalt
81.9952
77.9060
86.5373
48.2163
1343138091342820891999
95.6917
mlin-fermikitINDELI6_15map_siren*
81.7172
75.7377
88.7218
80.5981
231742363028
93.3333
mlin-fermikitINDELI6_15map_sirenhet
82.8019
79.7203
86.1314
81.4363
114291181917
89.4737
mlin-fermikitINDELI6_15map_sirenhetalt
79.3388
66.6667
97.9592
73.6559
48244811
100.0000
mlin-fermikitINDELI6_15map_sirenhomalt
81.7259
76.6667
87.5000
82.1029
6921701010
100.0000
rpoplin-dv42INDELI16_PLUSmap_siren*
91.4854
87.2093
96.2025
77.4929
75117632
66.6667
rpoplin-dv42INDELI16_PLUSmap_sirenhet
92.6316
89.7959
95.6522
77.1144
4454421
50.0000
rpoplin-dv42INDELI16_PLUSmap_sirenhetalt
89.6552
81.2500
100.0000
79.4118
1331400
rpoplin-dv42INDELI16_PLUSmap_sirenhomalt
90.0000
85.7143
94.7368
76.8293
1831811
100.0000
rpoplin-dv42INDELD16_PLUSmap_siren*
89.2193
83.9161
95.2381
89.8795
1202312063
50.0000
rpoplin-dv42INDELD16_PLUSmap_sirenhet
90.0217
87.1795
93.0556
91.7526
68106753
60.0000
rpoplin-dv42INDELD16_PLUSmap_sirenhetalt
80.7692
67.7419
100.0000
73.8095
21102200
rpoplin-dv42INDELD16_PLUSmap_sirenhomalt
93.9394
91.1765
96.8750
88.8889
3133110
0.0000
rpoplin-dv42INDELI1_5map_siren*
98.7675
98.5691
98.9667
80.4011
29624329693118
58.0645
rpoplin-dv42INDELI1_5map_sirenhet
98.4530
98.2748
98.6318
80.8695
16522916582315
65.2174
rpoplin-dv42INDELI1_5map_sirenhetalt
95.4545
93.7500
97.2222
89.4325
105710530
0.0000
rpoplin-dv42INDELI1_5map_sirenhomalt
99.5047
99.4224
99.5871
77.9738
12057120653
60.0000
rpoplin-dv42INDELI6_15map_siren*
93.6968
90.1639
97.5177
81.7829
2753027576
85.7143
rpoplin-dv42INDELI6_15map_sirenhet
92.4188
89.5105
95.5224
83.4568
1281512866
100.0000
rpoplin-dv42INDELI6_15map_sirenhetalt
91.8519
86.1111
98.4127
77.2563
62106210
0.0000
rpoplin-dv42INDELI6_15map_sirenhomalt
97.1429
94.4444
100.0000
81.5618
8558500
rpoplin-dv42SNPtimap_siren*
99.6562
99.5227
99.7902
53.3616
9987647999868210138
65.7143
rpoplin-dv42SNPtimap_sirenhet
99.5664
99.3973
99.7362
53.8516
620063766199716494
57.3171