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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 152 153 154 155 156 157 158 159 160 ... 1720 1721 » 7751-7800 / 86044 show all
ckim-dragen	INDEL	*	HG002compoundhet	hetalt	96.0007	92.5060	99.7699	50.0702	23293	1887	23417	54	54	100.0000
ckim-dragen	INDEL	*	HG002compoundhet	homalt	46.1333	99.2711	30.0488	84.8211	681	5	677	1576	1573	99.8096
ckim-dragen	INDEL	C16_PLUS	HG002compoundhet	*	0.0000	0.0000	100.0000	66.6667	0	0	1	0	0
ckim-dragen	INDEL	C16_PLUS	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	C16_PLUS	HG002compoundhet	hetalt	0.0000	0.0000	100.0000	66.6667	0	0	1	0	0
ckim-dragen	INDEL	C16_PLUS	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	SNP	*	HG002compoundhet	*	73.2436	85.0050	64.3413	46.5864	21950	3872	21988	12186	1203	9.8720
ciseli-custom	SNP	*	HG002compoundhet	het	65.9081	78.7276	56.6789	49.8597	11162	3016	11240	8591	230	2.6772
ciseli-custom	SNP	*	HG002compoundhet	hetalt	90.1141	82.4826	99.3017	17.9840	711	151	711	5	2	40.0000
ciseli-custom	SNP	*	HG002compoundhet	homalt	82.3846	93.4613	73.6552	42.1506	10077	705	10037	3590	971	27.0474
ckim-gatk	INDEL	I16_PLUS	HG002compoundhet	*	94.2299	92.2072	96.3432	52.0122	1976	167	1976	75	75	100.0000
ckim-gatk	INDEL	I16_PLUS	HG002compoundhet	het	85.1501	95.7447	76.6667	93.8017	45	2	23	7	7	100.0000
ckim-gatk	INDEL	I16_PLUS	HG002compoundhet	hetalt	95.8494	92.1166	99.8975	44.7808	1928	165	1950	2	2	100.0000
ckim-gatk	INDEL	I16_PLUS	HG002compoundhet	homalt	8.3333	100.0000	4.3478	72.9412	3	0	3	66	66	100.0000
ckim-gatk	SNP	*	HG002compoundhet	*	99.3973	99.0009	99.7970	41.7198	25564	258	25561	52	38	73.0769
ckim-gatk	SNP	*	HG002compoundhet	het	99.3772	99.0478	99.7088	46.6510	14043	135	14041	41	28	68.2927
ckim-gatk	SNP	*	HG002compoundhet	hetalt	98.8856	97.7958	100.0000	22.8728	843	19	843	0	0
ckim-gatk	SNP	*	HG002compoundhet	homalt	99.4644	99.0354	99.8971	35.0629	10678	104	10677	11	10	90.9091
ckim-gatk	INDEL	D6_15	HG002compoundhet	*	95.5310	94.8178	96.2551	36.1757	8563	468	8559	333	330	99.0991
ckim-gatk	INDEL	D6_15	HG002compoundhet	het	90.0227	98.3645	82.9851	68.6916	842	14	834	171	169	98.8304
ckim-gatk	INDEL	D6_15	HG002compoundhet	hetalt	96.9335	94.4301	99.5733	24.1244	7697	454	7701	33	33	100.0000
ckim-gatk	INDEL	D6_15	HG002compoundhet	homalt	27.1186	100.0000	15.6863	71.0775	24	0	24	129	128	99.2248
ckim-gatk	INDEL	I6_15	HG002compoundhet	*	94.2778	92.4567	96.1721	36.2689	8114	662	8115	323	321	99.3808
ckim-gatk	INDEL	I6_15	HG002compoundhet	het	86.2400	97.5962	77.2512	84.6657	203	5	163	48	47	97.9167
ckim-gatk	INDEL	I6_15	HG002compoundhet	hetalt	95.9864	92.3041	99.9748	28.2337	7880	657	7921	2	2	100.0000
ckim-gatk	INDEL	I6_15	HG002compoundhet	homalt	18.5075	100.0000	10.1974	63.1068	31	0	31	273	272	99.6337
ckim-gatk	INDEL	D16_PLUS	HG002compoundhet	*	95.5256	95.3012	95.7511	35.3496	2231	110	2231	99	96	96.9697
ckim-gatk	INDEL	D16_PLUS	HG002compoundhet	het	88.7912	99.7531	80.0000	59.4286	404	1	284	71	68	95.7746
ckim-gatk	INDEL	D16_PLUS	HG002compoundhet	hetalt	96.8969	94.3465	99.5891	25.8850	1819	109	1939	8	8	100.0000
ckim-gatk	INDEL	D16_PLUS	HG002compoundhet	homalt	44.4444	100.0000	28.5714	72.5490	8	0	8	20	20	100.0000
ckim-gatk	INDEL	D1_5	HG002compoundhet	*	95.9834	94.5321	97.4800	66.2715	11566	669	11566	299	296	98.9967
ckim-gatk	INDEL	D1_5	HG002compoundhet	het	96.2104	98.4375	94.0819	78.9081	1701	27	1701	107	105	98.1308
ckim-gatk	INDEL	D1_5	HG002compoundhet	hetalt	96.5709	93.7255	99.5943	58.2762	9575	641	9575	39	39	100.0000
ckim-gatk	INDEL	D1_5	HG002compoundhet	homalt	79.0191	99.6564	65.4628	87.5701	290	1	290	153	152	99.3464
ckim-gatk	SNP	ti	HG002compoundhet	*	99.4312	99.0159	99.8500	36.2044	17306	172	17306	26	21	80.7692
ckim-gatk	SNP	ti	HG002compoundhet	het	99.4351	99.0847	99.7881	40.5181	9418	87	9418	20	15	75.0000
ckim-gatk	SNP	ti	HG002compoundhet	hetalt	98.8646	97.7547	100.0000	22.2527	566	13	566	0	0
ckim-gatk	SNP	ti	HG002compoundhet	homalt	99.4702	99.0262	99.9181	30.6914	7322	72	7322	6	6	100.0000
ckim-gatk	INDEL	I1_5	HG002compoundhet	*	94.8213	92.3843	97.3904	66.1548	11415	941	11420	306	304	99.3464
ckim-gatk	INDEL	I1_5	HG002compoundhet	het	95.1264	98.8235	91.6959	86.6176	840	10	784	71	69	97.1831
ckim-gatk	INDEL	I1_5	HG002compoundhet	hetalt	95.6413	91.6793	99.9612	55.8202	10247	930	10308	4	4	100.0000
ckim-gatk	INDEL	I1_5	HG002compoundhet	homalt	73.8739	99.6960	58.6762	88.6290	328	1	328	231	231	100.0000
ciseli-custom	INDEL	C16_PLUS	HG002compoundhet	*	0.0000	0.0000	4.5455	90.6383	0	0	1	21	12	57.1429
ciseli-custom	INDEL	C16_PLUS	HG002compoundhet	het	0.0000	0.0000	100.0000	96.7742	0	0	1	0	0
ciseli-custom	INDEL	C16_PLUS	HG002compoundhet	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C16_PLUS	HG002compoundhet	homalt		0.0000	0.0000	89.7059	0	0	0	21	12	57.1429
ciseli-custom	INDEL	D16_PLUS	HG002compoundhet	*	6.2397	5.0406	8.1875	34.9864	118	2223	117	1312	1251	95.3506
ciseli-custom	INDEL	D16_PLUS	HG002compoundhet	het	17.8807	11.8519	36.3934	44.8463	48	357	111	194	186	95.8763
ciseli-custom	INDEL	D16_PLUS	HG002compoundhet	hetalt	0.0000	3.3195	0.0000	0.0000	64	1864	0	0	0
ciseli-custom	INDEL	D16_PLUS	HG002compoundhet	homalt	1.0601	75.0000	0.5338	31.6717	6	2	6	1118	1065	95.2594

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