PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
701-750 / 86044 show all
gduggal-bwafbINDELD6_15**
94.1659
91.7408
96.7228
49.8237
23937215525057849794
93.5218
gduggal-bwafbINDELD6_15*het
96.0906
93.5300
98.7954
45.4106
1084275017633215165
76.7442
gduggal-bwafbINDELD6_15*hetalt
90.9853
84.6464
98.3504
52.1249
6919125512522121
100.0000
gduggal-bwafbINDELD6_15*homalt
94.1794
97.6288
90.9654
58.3129
61761506172613608
99.1843
gduggal-bwafbINDELI16_PLUS**
66.2146
51.1369
93.9014
38.2990
326131163372219218
99.5434
gduggal-bwafbINDELI16_PLUS*het
55.7818
39.5143
94.8163
37.5746
107416441884103103
100.0000
gduggal-bwafbINDELI16_PLUS*hetalt
59.7317
43.8513
93.6441
57.0909
92011782211515
100.0000
gduggal-bwafbINDELI16_PLUS*homalt
86.5142
81.1659
92.6170
34.4514
12672941267101100
99.0099
gduggal-bwafbINDELI1_5**
97.8814
96.8991
98.8838
56.3942
145992467214678916571400
84.4900
gduggal-bwafbINDELI1_5*het
98.0966
97.2622
98.9454
56.5385
76877216482849883649
73.4994
gduggal-bwafbINDELI1_5*hetalt
90.3216
84.5735
96.9081
78.3569
946817274294137135
98.5401
gduggal-bwafbINDELI1_5*homalt
98.8253
98.7076
98.9433
52.6434
5964778159646637616
96.7033
gduggal-bwafbINDELI6_15**
87.8626
81.3399
95.5225
40.4474
20191463221206994970
97.5855
gduggal-bwafbINDELI6_15*het
88.0827
80.5342
97.1926
38.4775
8080195313848400379
94.7500
gduggal-bwafbINDELI6_15*hetalt
81.7221
72.8336
93.0818
54.0993
622823231480110109
99.0909
gduggal-bwafbINDELI6_15*homalt
93.3335
94.2940
92.3923
40.2909
58833565878484482
99.5868
gduggal-bwafbSNP***
99.7820
99.8619
99.7021
21.9848
3050417421730506569115775
8.5025
gduggal-bwafbSNP**het
99.6957
99.8616
99.5303
23.9839
1871007259418712158830595
6.7384
gduggal-bwafbSNP**hetalt
99.5989
99.7704
99.4279
53.2620
869286955
100.0000
gduggal-bwafbSNP**homalt
99.9194
99.8626
99.9762
18.5273
117854116211178572280175
62.5000
gduggal-bwafbSNPti**
99.8083
99.8659
99.7507
20.3177
2082722279620828585206495
9.5083
gduggal-bwafbSNPti*het
99.7363
99.8649
99.6080
22.2231
1280165173212802845038382
7.5824
gduggal-bwafbSNPti*hetalt
99.7425
99.8282
99.6569
53.0218
581158122
100.0000
gduggal-bwafbSNPti*homalt
99.9234
99.8676
99.9793
17.0184
8019761063801993166111
66.8675
gduggal-bwafbSNPtv**
99.7254
99.8534
99.5978
25.3671
96827614229683793911282
7.2104
gduggal-bwafbSNPtv*het
99.6077
99.8543
99.3624
27.5297
5908428625909313792213
5.6171
gduggal-bwafbSNPtv*hetalt
99.5989
99.7704
99.4279
53.2620
869286955
100.0000
gduggal-bwafbSNPtv*homalt
99.9109
99.8520
99.9697
21.5631
37656555837657911464
56.1404
gduggal-bwaplatINDEL***
92.6621
87.0843
99.0034
65.2816
3000424450029991730191851
61.3117
gduggal-bwaplatINDEL**het
92.4727
86.8430
98.8829
67.5454
168591255421685401904839
44.0651
gduggal-bwaplatINDEL**hetalt
82.4487
71.6091
97.1551
71.6669
18072716518066529513
96.9754
gduggal-bwaplatINDEL**homalt
94.8233
90.5786
99.4855
59.5744
11337911793113311586499
85.1536
gduggal-bwaplatINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
gduggal-bwaplatINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
gduggal-bwaplatINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatINDELC1_5**
60.0000
100.0000
64000
gduggal-bwaplatINDELC1_5*het
55.5556
100.0000
54000
gduggal-bwaplatINDELC1_5*hetalt
100.0000
100.0000
10000
gduggal-bwaplatINDELC1_5*homalt
0.0000
100.0000
00000
gduggal-bwaplatINDELC6_15**
0.0000
85.7143
0.0000
0.0000
61000
gduggal-bwaplatINDELC6_15*het
0.0000
85.7143
0.0000
0.0000
61000
gduggal-bwaplatINDELC6_15*hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatINDELC6_15*homalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatINDELD16_PLUS**
82.9287
71.7129
98.3034
72.8727
4865191948678465
77.3810
gduggal-bwaplatINDELD16_PLUS*het
80.5941
68.7559
97.3566
80.9524
217298721735943
72.8814
gduggal-bwaplatINDELD16_PLUS*hetalt
80.2709
67.4599
99.0881
50.5635
130462913041211
91.6667
gduggal-bwaplatINDELD16_PLUS*homalt
89.7870
82.0922
99.0734
63.7561
138930313901311
84.6154
gduggal-bwaplatINDELD1_5**
93.7723
88.9284
99.1742
65.9734
130498162471304301086611
56.2615
gduggal-bwaplatINDELD1_5*het
94.1987
89.7070
99.1640
66.4739
78560901478527662219
33.0816