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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 145 146 147 148 149 150 151 152 153 ... 1720 1721 » 7401-7450 / 86044 show all
jlack-gatk	SNP	tv	HG002compoundhet	*	99.3236	99.5965	99.0521	49.7619	8887	36	8882	85	24	28.2353
jlack-gatk	SNP	tv	HG002compoundhet	het	98.9462	99.4650	98.4329	56.5753	4648	25	4648	74	14	18.9189
jlack-gatk	SNP	tv	HG002compoundhet	hetalt	99.6512	99.4200	99.8834	22.4231	857	5	857	1	1	100.0000
jlack-gatk	SNP	tv	HG002compoundhet	homalt	99.7638	99.8229	99.7048	42.2900	3382	6	3377	10	9	90.0000
jlack-gatk	INDEL	I16_PLUS	HG002compoundhet	*	89.6882	87.2608	92.2546	52.5070	1870	273	1870	157	144	91.7197
jlack-gatk	INDEL	I16_PLUS	HG002compoundhet	het	61.9313	91.4894	46.8085	90.8382	43	4	22	25	17	68.0000
jlack-gatk	INDEL	I16_PLUS	HG002compoundhet	hetalt	93.0151	87.1476	99.7297	45.3148	1824	269	1845	5	4	80.0000
jlack-gatk	INDEL	I16_PLUS	HG002compoundhet	homalt	4.5113	100.0000	2.3077	65.0538	3	0	3	127	123	96.8504
jli-custom	INDEL	C16_PLUS	HG002compoundhet	*		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	C16_PLUS	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	C16_PLUS	HG002compoundhet	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	C16_PLUS	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	SNP	ti	HG002compoundhet	*	99.6570	99.7425	99.5716	36.7466	17433	45	17431	75	22	29.3333
jlack-gatk	SNP	ti	HG002compoundhet	het	99.4749	99.6739	99.2768	41.5881	9474	31	9472	69	16	23.1884
jlack-gatk	SNP	ti	HG002compoundhet	hetalt	99.6534	99.3092	100.0000	21.8750	575	4	575	0	0
jlack-gatk	SNP	ti	HG002compoundhet	homalt	99.8918	99.8648	99.9188	30.3225	7384	10	7384	6	6	100.0000
hfeng-pmm2	INDEL	D16_PLUS	HG002compoundhet	*	95.1177	93.2080	97.1073	33.8339	2182	159	2182	65	63	96.9231
hfeng-pmm2	INDEL	D16_PLUS	HG002compoundhet	het	86.2040	90.6173	82.2006	57.4966	367	38	254	55	53	96.3636
hfeng-pmm2	INDEL	D16_PLUS	HG002compoundhet	hetalt	96.7604	93.7241	100.0000	26.3804	1807	121	1920	0	0
hfeng-pmm2	INDEL	D16_PLUS	HG002compoundhet	homalt	61.5385	100.0000	44.4444	70.4918	8	0	8	10	10	100.0000
hfeng-pmm2	INDEL	I1_5	HG002compoundhet	*	96.1838	94.3347	98.1069	65.2150	11656	700	11660	225	222	98.6667
hfeng-pmm2	INDEL	I1_5	HG002compoundhet	het	89.4149	87.4118	91.5119	86.7066	743	107	690	64	62	96.8750
hfeng-pmm2	INDEL	I1_5	HG002compoundhet	hetalt	97.2799	94.7124	99.9906	57.4359	10586	591	10643	1	1	100.0000
hfeng-pmm2	INDEL	I1_5	HG002compoundhet	homalt	80.1471	99.3921	67.1458	86.0378	327	2	327	160	159	99.3750
hfeng-pmm2	INDEL	C6_15	HG002compoundhet	*		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm2	INDEL	C6_15	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm2	INDEL	C6_15	HG002compoundhet	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm2	INDEL	C6_15	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm2	INDEL	D6_15	HG002compoundhet	*	95.3103	92.7251	98.0438	33.3983	8374	657	8370	167	162	97.0060
hfeng-pmm2	INDEL	D6_15	HG002compoundhet	het	82.2726	79.2056	85.5867	66.5243	678	178	671	113	110	97.3451
hfeng-pmm2	INDEL	D6_15	HG002compoundhet	hetalt	96.9666	94.1234	99.9870	24.8188	7672	479	7675	1	0	0.0000
hfeng-pmm2	INDEL	D6_15	HG002compoundhet	homalt	47.5248	100.0000	31.1688	71.0526	24	0	24	53	52	98.1132
hfeng-pmm2	INDEL	I16_PLUS	HG002compoundhet	*	94.8024	92.3472	97.3917	52.6892	1979	164	1979	53	52	98.1132
hfeng-pmm2	INDEL	I16_PLUS	HG002compoundhet	het	89.2228	87.2340	91.3043	94.7005	41	6	21	2	2	100.0000
hfeng-pmm2	INDEL	I16_PLUS	HG002compoundhet	hetalt	96.0539	92.4510	99.9489	46.1750	1935	158	1955	1	1	100.0000
hfeng-pmm2	INDEL	I16_PLUS	HG002compoundhet	homalt	10.7143	100.0000	5.6604	76.6520	3	0	3	50	49	98.0000
hfeng-pmm2	INDEL	C1_5	HG002compoundhet	*	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
hfeng-pmm2	INDEL	C1_5	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm2	INDEL	C1_5	HG002compoundhet	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
hfeng-pmm2	INDEL	C1_5	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm2	INDEL	I6_15	HG002compoundhet	*	95.0368	93.1632	96.9873	36.8937	8176	600	8177	254	252	99.2126
hfeng-pmm2	INDEL	I6_15	HG002compoundhet	het	79.5908	79.8077	79.3750	86.5997	166	42	127	33	33	100.0000
hfeng-pmm2	INDEL	I6_15	HG002compoundhet	hetalt	96.6215	93.4637	100.0000	30.1298	7979	558	8019	0	0
hfeng-pmm2	INDEL	I6_15	HG002compoundhet	homalt	21.9081	100.0000	12.3016	63.4253	31	0	31	221	219	99.0950
hfeng-pmm2	INDEL	D1_5	HG002compoundhet	*	95.6235	92.5950	98.8568	63.0617	11329	906	11328	131	126	96.1832
hfeng-pmm2	INDEL	D1_5	HG002compoundhet	het	87.2979	80.1505	95.8449	75.4255	1385	343	1384	60	57	95.0000
hfeng-pmm2	INDEL	D1_5	HG002compoundhet	hetalt	97.1670	94.5086	99.9793	58.9151	9655	561	9655	2	0	0.0000
hfeng-pmm2	INDEL	D1_5	HG002compoundhet	homalt	89.0601	99.3127	80.7263	78.1840	289	2	289	69	69	100.0000
jmaeng-gatk	INDEL	*	HG002compoundhet	*	93.6190	92.3632	94.9094	62.9257	27672	2288	27556	1478	1464	99.0528
jmaeng-gatk	INDEL	*	HG002compoundhet	het	92.6044	97.8749	87.8724	79.5506	4007	87	3775	521	513	98.4645

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