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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
7251-7300 / 86044 show all
eyeh-varpipeINDELC6_15HG002compoundhethetalt
0.0000
0.0000
91.3978
83.9655
008587
87.5000
eyeh-varpipeINDELC6_15HG002compoundhethomalt
0.0000
0.0000
2.8571
84.2342
0013430
88.2353
eyeh-varpipeINDELI6_15HG002compoundhet*
36.3679
28.3500
50.7094
30.4777
24886288250224322425
99.7122
eyeh-varpipeINDELI6_15HG002compoundhethet
24.7604
59.6154
15.6250
55.8621
1248470378375
99.2063
eyeh-varpipeINDELI6_15HG002compoundhethetalt
42.7960
27.4218
97.4089
29.0841
2341619624066463
98.4375
eyeh-varpipeINDELI6_15HG002compoundhethomalt
2.5353
74.1935
1.2897
22.4317
2382619901987
99.8492
eyeh-varpipeINDELD6_15HG002compoundhet*
39.7758
35.3560
45.4585
32.6471
31935838313837653754
99.7078
eyeh-varpipeINDELD6_15HG002compoundhethet
60.1947
80.0234
48.2412
75.0000
68517196103100
97.0874
eyeh-varpipeINDELD6_15HG002compoundhethetalt
46.3719
30.5239
96.4480
28.8641
248856633014111110
99.0991
eyeh-varpipeINDELD6_15HG002compoundhethomalt
1.5501
83.3333
0.7823
29.2688
2042835513544
99.8029
dgrover-gatkINDELI1_5HG002compoundhet*
96.3058
95.1360
97.5048
66.8717
1175560111762301300
99.6678
dgrover-gatkINDELI1_5HG002compoundhethet
95.2481
98.5882
92.1269
86.8653
838127846766
98.5075
dgrover-gatkINDELI1_5HG002compoundhethetalt
97.2852
94.7392
99.9718
57.2014
105895881065033
100.0000
dgrover-gatkINDELI1_5HG002compoundhethomalt
73.8739
99.6960
58.6762
88.9153
3281328231231
100.0000
dgrover-gatkSNPtiHG002compoundhet*
99.8369
99.8284
99.8455
35.6925
1744830174462721
77.7778
dgrover-gatkSNPtiHG002compoundhethet
99.7790
99.7685
99.7895
39.8442
94832294812014
70.0000
dgrover-gatkSNPtiHG002compoundhethetalt
99.8270
99.6546
100.0000
22.2372
577257700
dgrover-gatkSNPtiHG002compoundhethomalt
99.9121
99.9189
99.9053
30.4654
73886738877
100.0000
dgrover-gatkINDELI16_PLUSHG002compoundhet*
94.7743
93.0938
96.5167
53.0120
199514819957272
100.0000
dgrover-gatkINDELI16_PLUSHG002compoundhethet
85.1501
95.7447
76.6667
93.8650
4522377
100.0000
dgrover-gatkINDELI16_PLUSHG002compoundhethetalt
96.3626
93.0244
99.9492
46.0126
1947146196911
100.0000
dgrover-gatkINDELI16_PLUSHG002compoundhethomalt
8.5714
100.0000
4.4776
74.3295
3036464
100.0000
dgrover-gatkSNP*HG002compoundhet*
99.8063
99.8102
99.8025
41.2435
2577349257665136
70.5882
dgrover-gatkSNP*HG002compoundhethet
99.7355
99.7390
99.7320
46.0622
1414137141393824
63.1579
dgrover-gatkSNP*HG002compoundhethetalt
99.8257
99.6520
100.0000
22.7518
859385900
dgrover-gatkSNP*HG002compoundhethomalt
99.8980
99.9165
99.8794
34.8304
107739107681312
92.3077
dgrover-gatkINDELD1_5HG002compoundhet*
96.6517
95.7826
97.5368
66.6083
1171951611721296293
98.9865
dgrover-gatkINDELD1_5HG002compoundhethet
96.0763
98.4375
93.8258
79.0071
1701271702112111
99.1071
dgrover-gatkINDELD1_5HG002compoundhethetalt
97.3579
95.2232
99.5905
58.8743
972848897294039
97.5000
dgrover-gatkINDELD1_5HG002compoundhethomalt
80.0000
99.6564
66.8203
87.9210
2901290144143
99.3056
dgrover-gatkINDELD6_15HG002compoundhet*
95.8086
95.3161
96.3062
36.3267
86084238604330327
99.0909
dgrover-gatkINDELD6_15HG002compoundhethet
90.2073
98.2477
83.3834
68.6441
84115833166164
98.7952
dgrover-gatkINDELD6_15HG002compoundhethetalt
97.2251
94.9945
99.5630
24.6392
774340877473433
97.0588
dgrover-gatkINDELD6_15HG002compoundhethomalt
26.9663
100.0000
15.5844
70.3846
24024130130
100.0000
dgrover-gatkSNPtvHG002compoundhet*
99.7478
99.7647
99.7310
49.0520
89022188972415
62.5000
dgrover-gatkSNPtvHG002compoundhethet
99.6470
99.6790
99.6151
55.4242
46581546581810
55.5556
dgrover-gatkSNPtvHG002compoundhethetalt
99.8257
99.6520
100.0000
22.7518
859385900
dgrover-gatkSNPtvHG002compoundhethomalt
99.8671
99.9115
99.8228
42.6879
33853338065
83.3333
dgrover-gatkINDELI6_15HG002compoundhet*
94.9104
93.5962
96.2620
37.4707
82145628215319317
99.3730
dgrover-gatkINDELI6_15HG002compoundhethet
86.2668
98.0769
76.9953
84.5091
20441644948
97.9592
dgrover-gatkINDELI6_15HG002compoundhethetalt
96.6156
93.4637
99.9875
29.8618
7979558802011
100.0000
dgrover-gatkINDELI6_15HG002compoundhethomalt
18.7311
100.0000
10.3333
64.1577
31031269268
99.6283
hfeng-pmm3INDELI16_PLUSHG002compoundhet*
95.0875
92.5805
97.7340
52.1790
198415919844645
97.8261
hfeng-pmm3INDELI16_PLUSHG002compoundhethet
91.1593
87.2340
95.4545
94.5679
4162111
100.0000
hfeng-pmm3INDELI16_PLUSHG002compoundhethetalt
96.1827
92.6899
99.9490
46.0226
1940153196011
100.0000
hfeng-pmm3INDELI16_PLUSHG002compoundhethomalt
12.0000
100.0000
6.3830
77.2947
3034443
97.7273
hfeng-pmm3SNP*HG002compoundhet*
97.8284
95.8679
99.8709
39.6499
247551067247553215
46.8750
hfeng-pmm3SNP*HG002compoundhethet
96.0659
92.5730
99.8327
43.9121
13125105313125225
22.7273
hfeng-pmm3SNP*HG002compoundhethetalt
99.8839
99.7680
100.0000
22.8700
860286000
hfeng-pmm3SNP*HG002compoundhethomalt
99.8980
99.8887
99.9072
34.7339
1077012107701010
100.0000