PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
7151-7200 / 86044 show all
ckim-vqsrINDELI16_PLUSHG002compoundhethetalt
95.7976
92.0210
99.8974
44.8061
1926167194822
100.0000
ckim-vqsrINDELI16_PLUSHG002compoundhethomalt
8.3333
100.0000
4.3478
72.9412
3036666
100.0000
ckim-vqsrINDELC1_5HG002compoundhet*
0.0000
100.0000
0.0000
0.0000
10000
ckim-vqsrINDELC1_5HG002compoundhethet
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELC1_5HG002compoundhethetalt
0.0000
100.0000
0.0000
0.0000
10000
ckim-vqsrINDELC1_5HG002compoundhethomalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELC6_15HG002compoundhet*
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELC6_15HG002compoundhethet
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELC6_15HG002compoundhethetalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELC6_15HG002compoundhethomalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELI6_15HG002compoundhet*
94.2580
92.3997
96.1926
36.2881
81096678110321319
99.3769
ckim-vqsrINDELI6_15HG002compoundhethet
86.6987
97.5962
77.9904
84.7889
20351634645
97.8261
ckim-vqsrINDELI6_15HG002compoundhethetalt
95.9547
92.2455
99.9747
28.2465
7875662791622
100.0000
ckim-vqsrINDELI6_15HG002compoundhethomalt
18.5075
100.0000
10.1974
63.1068
31031273272
99.6337
ckim-vqsrINDELD6_15HG002compoundhet*
95.5291
94.7736
96.2967
36.1965
85594728555329326
99.0881
ckim-vqsrINDELD6_15HG002compoundhethet
89.9917
98.0140
83.1832
68.8202
83917831168166
98.8095
ckim-vqsrINDELD6_15HG002compoundhethetalt
96.9271
94.4179
99.5733
24.1268
769645577003333
100.0000
ckim-vqsrINDELD6_15HG002compoundhethomalt
27.2727
100.0000
15.7895
71.2121
24024128127
99.2188
egarrison-hhgaINDELC1_5HG002compoundhet*
100.0000
100.0000
10000
egarrison-hhgaINDELC1_5HG002compoundhethet
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC1_5HG002compoundhethetalt
100.0000
100.0000
10000
egarrison-hhgaINDELC1_5HG002compoundhethomalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC6_15HG002compoundhet*
0.0000
0.0000
91.3043
00020
0.0000
egarrison-hhgaINDELC6_15HG002compoundhethet
0.0000
0.0000
71.4286
00020
0.0000
egarrison-hhgaINDELC6_15HG002compoundhethetalt
0.0000
100.0000
00000
egarrison-hhgaINDELC6_15HG002compoundhethomalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELD6_15HG002compoundhet*
61.1341
52.4527
73.2591
39.3063
47374294487117781713
96.3442
egarrison-hhgaINDELD6_15HG002compoundhethet
59.7254
89.0187
44.9378
47.8055
76294133616371603
97.9230
egarrison-hhgaINDELD6_15HG002compoundhethetalt
65.0591
48.4726
98.9014
28.1522
3951420035113934
87.1795
egarrison-hhgaINDELD6_15HG002compoundhethomalt
32.0000
100.0000
19.0476
60.3774
2402410276
74.5098
egarrison-hhgaINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELD1_5HG002compoundhet*
69.0217
68.1406
69.9260
60.9500
83373898841036173521
97.3459
egarrison-hhgaINDELD1_5HG002compoundhethet
51.9684
88.9468
36.7077
50.8341
1537191196933953320
97.7909
egarrison-hhgaINDELD1_5HG002compoundhethetalt
77.6385
63.8117
99.1149
65.8609
6519369761595548
87.2727
egarrison-hhgaINDELD1_5HG002compoundhethomalt
76.1097
96.5636
62.8062
73.3847
28110282167153
91.6168
egarrison-hhgaINDEL*HG002compoundhet*
77.4600
76.5788
78.3617
71.3882
2294370172348564856131
94.5412
egarrison-hhgaINDEL*HG002compoundhethet
60.4981
88.2511
46.0244
58.9093
3613481470655195300
96.0319
egarrison-hhgaINDEL*HG002compoundhethetalt
84.8570
74.1223
99.2275
55.5672
18664651618112141123
87.2340
egarrison-hhgaINDEL*HG002compoundhethomalt
61.2199
97.0845
44.7051
74.4521
66620667825708
85.8182
egarrison-hhgaINDELI16_PLUSHG002compoundhet*
86.9177
82.7345
91.5464
49.7800
17733701776164118
71.9512
egarrison-hhgaINDELI16_PLUSHG002compoundhethet
50.9653
70.2128
40.0000
86.0681
3314365438
70.3704
egarrison-hhgaINDELI16_PLUSHG002compoundhethetalt
90.3511
82.9909
99.1438
40.2252
173735617371511
73.3333
egarrison-hhgaINDELI16_PLUSHG002compoundhethomalt
5.9406
100.0000
3.0612
65.7343
3039569
72.6316
egarrison-hhgaINDELD16_PLUSHG002compoundhet*
61.7860
49.7651
81.4641
41.2623
116511761213276256
92.7536
egarrison-hhgaINDELD16_PLUSHG002compoundhethet
73.4421
80.9877
67.1827
49.1339
32877434212201
94.8113
egarrison-hhgaINDELD16_PLUSHG002compoundhethetalt
60.1689
43.1017
99.6134
31.8701
831109777333
100.0000
egarrison-hhgaINDELD16_PLUSHG002compoundhethomalt
16.0000
75.0000
8.9552
46.8254
6266152
85.2459