PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
71001-71050 / 86044 show all
rpoplin-dv42INDELD16_PLUSmap_l150_m2_e1*
94.1176
88.8889
100.0000
94.2238
1621600
rpoplin-dv42INDELD16_PLUSmap_l150_m2_e1het
96.7742
93.7500
100.0000
91.8919
1511500
rpoplin-dv42INDELD16_PLUSmap_l150_m2_e1hetalt
66.6667
50.0000
100.0000
94.1176
11100
rpoplin-dv42INDELD16_PLUSmap_l150_m2_e1homalt
0.0000
100.0000
00000
rpoplin-dv42SNPtimap_l150_m2_e1*
99.1367
98.9191
99.3552
75.1649
204992242049513393
69.9248
rpoplin-dv42SNPtimap_l150_m2_e1het
98.9954
98.8167
99.1746
76.0502
128611541285710768
63.5514
rpoplin-dv42SNPtimap_l150_m2_e1hetalt
93.7500
100.0000
88.2353
87.5912
1501522
100.0000
rpoplin-dv42SNPtimap_l150_m2_e1homalt
99.3872
99.0901
99.6862
73.4415
76237076232423
95.8333
rpoplin-dv42INDELD1_5map_l150_m2_e1*
98.2028
98.2005
98.2051
88.8460
76414766147
50.0000
rpoplin-dv42INDELD1_5map_l150_m2_e1het
97.9860
97.7011
98.2726
88.3079
5101251292
22.2222
rpoplin-dv42INDELD1_5map_l150_m2_e1hetalt
93.3333
87.5000
100.0000
98.1081
71700
rpoplin-dv42INDELD1_5map_l150_m2_e1homalt
98.8000
99.5968
98.0159
88.3710
247124755
100.0000
rpoplin-dv42INDELD6_15map_l150_m2_e1*
98.2249
97.6471
98.8095
91.9617
8328311
100.0000
rpoplin-dv42INDELD6_15map_l150_m2_e1het
98.9474
100.0000
97.9167
92.6267
4704711
100.0000
rpoplin-dv42INDELD6_15map_l150_m2_e1hetalt
94.1176
88.8889
100.0000
92.3810
81800
rpoplin-dv42INDELD6_15map_l150_m2_e1homalt
98.2456
96.5517
100.0000
90.3114
2812800
rpoplin-dv42INDELC6_15map_l150_m2_e1*
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15map_l150_m2_e1het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15map_l150_m2_e1hetalt
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15map_l150_m2_e1homalt
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD16_PLUSmap_l150_m2_e1*
76.9231
83.3333
71.4286
97.8373
1531562
33.3333
ckim-dragenINDELD16_PLUSmap_l150_m2_e1het
81.0811
93.7500
71.4286
97.1812
1511562
33.3333
ckim-dragenINDELD16_PLUSmap_l150_m2_e1hetalt
0.0000
100.0000
02000
ckim-dragenINDELD16_PLUSmap_l150_m2_e1homalt
0.0000
100.0000
00000
ckim-dragenINDELC1_5map_l150_m2_e1*
0.0000
100.0000
00000
ckim-dragenINDELC1_5map_l150_m2_e1het
0.0000
0.0000
0.0000
00000
ckim-dragenINDELC1_5map_l150_m2_e1hetalt
0.0000
100.0000
00000
ckim-dragenINDELC1_5map_l150_m2_e1homalt
0.0000
0.0000
0.0000
00000
ckim-dragenINDELC6_15map_l150_m2_e1*
0.0000
0.0000
0.0000
00000
ckim-dragenINDELC6_15map_l150_m2_e1het
0.0000
0.0000
0.0000
00000
ckim-dragenINDELC6_15map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
00000
ckim-dragenINDELC6_15map_l150_m2_e1homalt
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15map_l150_m2_e1*
96.4286
95.2941
97.5904
93.1800
8148120
0.0000
ckim-dragenINDELD6_15map_l150_m2_e1het
97.9167
100.0000
95.9184
93.8826
4704720
0.0000
ckim-dragenINDELD6_15map_l150_m2_e1hetalt
87.5000
77.7778
100.0000
90.9091
72700
ckim-dragenINDELD6_15map_l150_m2_e1homalt
96.4286
93.1034
100.0000
92.0354
2722700
ckim-dragenINDELI16_PLUSmap_l150_m2_e1*
86.9565
90.9091
83.3333
95.3668
1011020
0.0000
ckim-dragenINDELI16_PLUSmap_l150_m2_e1het
92.3077
100.0000
85.7143
96.1749
60610
0.0000
ckim-dragenINDELI16_PLUSmap_l150_m2_e1hetalt
66.6667
50.0000
100.0000
93.7500
11100
ckim-dragenINDELI16_PLUSmap_l150_m2_e1homalt
85.7143
100.0000
75.0000
93.3333
30310
0.0000
ckim-dragenINDELI1_5map_l150_m2_e1*
95.4459
94.7269
96.1759
90.8774
50328503205
25.0000
ckim-dragenINDELI1_5map_l150_m2_e1het
93.6184
92.4290
94.8387
92.0082
29324294162
12.5000
ckim-dragenINDELI1_5map_l150_m2_e1hetalt
94.7368
90.0000
100.0000
95.3368
91900
ckim-dragenINDELI1_5map_l150_m2_e1homalt
98.2837
98.5294
98.0392
87.7182
201320043
75.0000
ckim-dragenINDELD1_5map_l150_m2_e1*
96.8643
97.4293
96.3057
90.2509
75820756294
13.7931
ckim-dragenINDELD1_5map_l150_m2_e1het
96.2144
97.5096
94.9533
90.7487
50913508272
7.4074
ckim-dragenINDELD1_5map_l150_m2_e1hetalt
76.9231
62.5000
100.0000
97.7974
53500
ckim-dragenINDELD1_5map_l150_m2_e1homalt
98.7838
98.3871
99.1837
88.0020
244424322
100.0000
ckim-dragenINDELC16_PLUSmap_l150_m2_e1*
0.0000
0.0000
0.0000
00000
ckim-dragenINDELC16_PLUSmap_l150_m2_e1het
0.0000
0.0000
0.0000
00000