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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
6951-7000 / 86044 show all
eyeh-varpipeINDELD16_PLUSHG002complexvarhetalt
28.7793
17.0040
93.5897
61.3861
422052191515
100.0000
eyeh-varpipeINDELD16_PLUSHG002complexvarhomalt
44.7304
49.8270
40.5797
45.3249
144145140205205
100.0000
eyeh-varpipeINDELI16_PLUSHG002complexvar*
52.3530
38.8846
80.0955
45.7686
509800503125124
99.2000
eyeh-varpipeINDELI16_PLUSHG002complexvarhet
50.6283
38.3459
74.4868
43.8221
2554102548787
100.0000
eyeh-varpipeINDELI16_PLUSHG002complexvarhetalt
21.9016
12.5373
86.5385
70.1149
422934577
100.0000
eyeh-varpipeINDELI16_PLUSHG002complexvarhomalt
76.6428
68.6084
86.8085
37.6658
212972043130
96.7742
eyeh-varpipeINDELI1_5HG002complexvar*
95.9629
94.9405
97.0075
49.9241
31675168831023957917
95.8203
eyeh-varpipeINDELI1_5HG002complexvarhet
97.2764
97.2566
97.2962
48.7706
1769049917129476444
93.2773
eyeh-varpipeINDELI1_5HG002complexvarhetalt
71.6240
56.8366
96.8118
75.7679
98174512454139
95.1220
eyeh-varpipeINDELI1_5HG002complexvarhomalt
96.6684
96.6984
96.6384
45.8931
1300444412649440434
98.6364
eyeh-varpipeINDELI6_15HG002complexvar*
76.1535
69.3656
84.4139
46.8082
332414683320613606
98.8581
eyeh-varpipeINDELI6_15HG002complexvarhet
83.9009
81.8684
86.0369
46.7354
19284271867303298
98.3498
eyeh-varpipeINDELI6_15HG002complexvarhetalt
50.4268
34.5053
93.6293
59.7826
4228014853333
100.0000
eyeh-varpipeINDELI6_15HG002complexvarhomalt
78.9714
80.2306
77.7510
38.7303
974240968277275
99.2780
eyeh-varpipeINDELD6_15HG002complexvar*
80.0189
76.9521
83.3403
49.7370
408012223982796779
97.8643
eyeh-varpipeINDELD6_15HG002complexvarhet
89.4381
87.7564
91.1854
45.1275
27383822100203195
96.0591
eyeh-varpipeINDELD6_15HG002complexvarhetalt
51.3277
35.9329
89.8020
58.8427
364649907103102
99.0291
eyeh-varpipeINDELD6_15HG002complexvarhomalt
74.1328
83.6612
66.5529
48.6865
978191975490482
98.3673
eyeh-varpipeINDELC6_15HG002complexvar*
91.6784
100.0000
84.6354
83.7632
403255949
83.0508
eyeh-varpipeINDELC6_15HG002complexvarhet
98.2935
100.0000
96.6443
81.6953
4014455
100.0000
eyeh-varpipeINDELC6_15HG002complexvarhetalt
0.0000
0.0000
86.0000
87.6847
00861413
92.8571
eyeh-varpipeINDELC6_15HG002complexvarhomalt
0.0000
0.0000
70.3704
81.7321
00954031
77.5000
eyeh-varpipeINDELD1_5HG002complexvar*
96.8177
96.1241
97.5214
52.6173
31447126830808783734
93.7420
eyeh-varpipeINDELD1_5HG002complexvarhet
98.4401
97.6258
99.2681
46.7116
202724931885313998
70.5036
eyeh-varpipeINDELD1_5HG002complexvarhetalt
66.7172
51.5533
94.5191
75.2098
6976551759102101
99.0196
eyeh-varpipeINDELD1_5HG002complexvarhomalt
96.8706
98.8677
94.9525
54.3549
1047812010196542535
98.7085
dgrover-gatkINDELI16_PLUSHG002complexvar*
98.9256
98.4721
99.3832
67.6397
128920128988
100.0000
dgrover-gatkINDELI16_PLUSHG002complexvarhet
99.3949
98.7970
100.0000
64.8333
657863300
dgrover-gatkINDELI16_PLUSHG002complexvarhetalt
97.8993
96.4179
99.4269
69.1424
3231234722
100.0000
dgrover-gatkINDELI16_PLUSHG002complexvarhomalt
99.0385
100.0000
98.0952
70.7521
309030966
100.0000
dgrover-gatkSNP*HG002complexvar*
99.9517
99.9260
99.9773
19.0606
75382355875366817188
51.4620
dgrover-gatkSNP*HG002complexvarhet
99.9434
99.9156
99.9712
18.5452
46510439346497413453
39.5522
dgrover-gatkSNP*HG002complexvarhetalt
99.6764
99.3548
100.0000
36.3636
308230800
dgrover-gatkSNP*HG002complexvarhomalt
99.9653
99.9435
99.9872
19.8551
2884111632883863735
94.5946
dgrover-gatkSNPtiHG002complexvar*
99.9530
99.9268
99.9791
17.5262
50806437250800010656
52.8302
dgrover-gatkSNPtiHG002complexvarhet
99.9452
99.9164
99.9739
17.0118
3145032633144498232
39.0244
dgrover-gatkSNPtiHG002complexvarhetalt
99.5146
99.0338
100.0000
35.9375
205220500
dgrover-gatkSNPtiHG002complexvarhomalt
99.9661
99.9447
99.9876
18.3249
1933561071933462424
100.0000
dgrover-gatkSNPtvHG002complexvar*
99.9486
99.9236
99.9736
22.0729
2459641882458736532
49.2308
dgrover-gatkSNPtvHG002complexvarhet
99.9396
99.9138
99.9655
21.5720
1506011301505255221
40.3846
dgrover-gatkSNPtvHG002complexvarhetalt
99.6764
99.3548
100.0000
36.3636
308230800
dgrover-gatkSNPtvHG002complexvarhomalt
99.9637
99.9411
99.9863
22.7977
9505556950401311
84.6154
dgrover-gatkINDELI6_15HG002complexvar*
98.6793
98.2053
99.1579
57.8639
47068647104039
97.5000
dgrover-gatkINDELI6_15HG002complexvarhet
99.4230
99.0658
99.7827
59.6952
233322229654
80.0000
dgrover-gatkINDELI6_15HG002complexvarhetalt
97.3563
94.8487
100.0000
56.1679
116063120100
dgrover-gatkINDELI6_15HG002complexvarhomalt
98.5378
99.9176
97.1955
55.8074
1213112133535
100.0000
dgrover-gatkINDELD1_5HG002complexvar*
99.6498
99.5323
99.7675
58.6672
32562153326177666
86.8421
dgrover-gatkINDELD1_5HG002complexvarhet
99.8048
99.6966
99.9132
56.2931
2070263207101811
61.1111
dgrover-gatkINDELD1_5HG002complexvarhetalt
95.3242
93.9349
96.7552
73.1272
12708213124443
97.7273
dgrover-gatkINDELD1_5HG002complexvarhomalt
99.8963
99.9245
99.8680
60.1555
105908105951412
85.7143