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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 133 134 135 136 137 138 139 140 141 ... 1720 1721 » 6801-6850 / 86044 show all
jmaeng-gatk	SNP	tv	HG002complexvar	*	99.5035	99.0473	99.9639	22.5835	243807	2345	243715	88	31	35.2273
jmaeng-gatk	SNP	tv	HG002complexvar	het	99.6867	99.4221	99.9526	22.2557	149860	871	149782	71	16	22.5352
jmaeng-gatk	SNP	tv	HG002complexvar	hetalt	97.8723	96.4516	99.3355	40.5138	299	11	299	2	2	100.0000
jmaeng-gatk	SNP	tv	HG002complexvar	homalt	99.2171	98.4618	99.9840	23.0284	93648	1463	93634	15	13	86.6667
jmaeng-gatk	INDEL	I6_15	HG002complexvar	*	97.9019	96.8698	98.9563	57.2482	4642	150	4646	49	49	100.0000
jmaeng-gatk	INDEL	I6_15	HG002complexvar	het	99.1867	98.5563	99.8253	59.8421	2321	34	2285	4	4	100.0000
jmaeng-gatk	INDEL	I6_15	HG002complexvar	hetalt	95.0665	90.5969	100.0000	53.0086	1108	115	1148	0	0
jmaeng-gatk	INDEL	I6_15	HG002complexvar	homalt	98.1392	99.9176	96.4229	55.6886	1213	1	1213	45	45	100.0000
jmaeng-gatk	INDEL	D1_5	HG002complexvar	*	99.4486	99.1930	99.7055	58.6476	32451	264	32505	96	76	79.1667
jmaeng-gatk	INDEL	D1_5	HG002complexvar	het	99.6962	99.5666	99.8262	56.4161	20675	90	20679	36	18	50.0000
jmaeng-gatk	INDEL	D1_5	HG002complexvar	hetalt	92.2064	88.1657	96.6354	72.5869	1192	160	1235	43	43	100.0000
jmaeng-gatk	INDEL	D1_5	HG002complexvar	homalt	99.8538	99.8679	99.8397	60.1891	10584	14	10591	17	15	88.2353
jmaeng-gatk	INDEL	I16_PLUS	HG002complexvar	*	98.2253	97.2498	99.2206	67.1110	1273	36	1273	10	9	90.0000
jmaeng-gatk	INDEL	I16_PLUS	HG002complexvar	het	99.0895	98.1955	100.0000	64.9055	653	12	631	0	0
jmaeng-gatk	INDEL	I16_PLUS	HG002complexvar	hetalt	95.8690	92.8358	99.1071	67.4419	311	24	333	3	3	100.0000
jmaeng-gatk	INDEL	I16_PLUS	HG002complexvar	homalt	98.8800	100.0000	97.7848	70.4949	309	0	309	7	6	85.7143
jmaeng-gatk	INDEL	I1_5	HG002complexvar	*	99.3649	98.9270	99.8067	56.9963	33005	358	33051	64	46	71.8750
jmaeng-gatk	INDEL	I1_5	HG002complexvar	het	99.6695	99.5052	99.8344	58.2792	18099	90	18081	30	14	46.6667
jmaeng-gatk	INDEL	I1_5	HG002complexvar	hetalt	91.9469	85.2839	99.7392	69.0289	1472	254	1530	4	4	100.0000
jmaeng-gatk	INDEL	I1_5	HG002complexvar	homalt	99.8366	99.8959	99.7773	52.9712	13434	14	13440	30	28	93.3333
jpowers-varprowl	INDEL	I6_15	HG002complexvar	*	68.3061	61.4775	76.8413	54.9585	2946	1846	2963	893	875	97.9843
jpowers-varprowl	INDEL	I6_15	HG002complexvar	het	76.9804	82.9299	71.8274	56.3262	1953	402	1981	777	772	99.3565
jpowers-varprowl	INDEL	I6_15	HG002complexvar	hetalt	0.0000	1.3083	0.0000	0.0000	16	1207	0	0	0
jpowers-varprowl	INDEL	I6_15	HG002complexvar	homalt	84.7204	80.4778	89.4353	51.1131	977	237	982	116	103	88.7931
jpowers-varprowl	SNP	tv	HG002complexvar	*	99.3235	99.1623	99.4852	24.4097	244090	2062	244285	1264	803	63.5285
jpowers-varprowl	SNP	tv	HG002complexvar	het	99.3313	98.8748	99.7919	23.6187	149035	1696	149155	311	60	19.2926
jpowers-varprowl	SNP	tv	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	310	0	0	0
jpowers-varprowl	SNP	tv	HG002complexvar	homalt	99.4724	99.9411	99.0081	25.6082	95055	56	95130	953	743	77.9643
ltrigg-rtg1	INDEL	*	HG002complexvar	*	98.8636	98.1465	99.5912	55.0476	75511	1426	75278	309	190	61.4887
ltrigg-rtg1	INDEL	*	HG002complexvar	het	98.9136	98.2515	99.5847	53.0906	45404	808	44604	186	79	42.4731
ltrigg-rtg1	INDEL	*	HG002complexvar	hetalt	94.3098	90.8354	98.0606	74.9985	3360	339	4045	80	79	98.7500
ltrigg-rtg1	INDEL	*	HG002complexvar	homalt	99.4013	98.9677	99.8388	52.4987	26747	279	26629	43	32	74.4186
ltrigg-rtg1	INDEL	C16_PLUS	HG002complexvar	*	0.0000	0.0000	95.5224	89.8792	0	0	64	3	3	100.0000
ltrigg-rtg1	INDEL	C16_PLUS	HG002complexvar	het	0.0000	0.0000	95.4545	90.4762	0	0	21	1	1	100.0000
ltrigg-rtg1	INDEL	C16_PLUS	HG002complexvar	hetalt	0.0000	0.0000	96.2963	87.6147	0	0	26	1	1	100.0000
ltrigg-rtg1	INDEL	C16_PLUS	HG002complexvar	homalt	0.0000	0.0000	94.4444	91.5493	0	0	17	1	1	100.0000
ltrigg-rtg1	INDEL	C1_5	HG002complexvar	*	91.9971	85.7143	99.2739	88.1471	6	1	957	7	2	28.5714
ltrigg-rtg1	INDEL	C1_5	HG002complexvar	het	91.8033	85.7143	98.8235	86.8787	6	1	420	5	1	20.0000
ltrigg-rtg1	INDEL	C1_5	HG002complexvar	hetalt	0.0000	0.0000	99.6183	86.5847	0	0	261	1	1	100.0000
ltrigg-rtg1	INDEL	C1_5	HG002complexvar	homalt	0.0000	0.0000	99.6390	90.5814	0	0	276	1	0	0.0000
jpowers-varprowl	SNP	ti	HG002complexvar	*	99.5182	99.3169	99.7203	18.7923	504961	3473	505119	1417	799	56.3867
jpowers-varprowl	SNP	ti	HG002complexvar	het	99.4252	98.9938	99.8603	18.1914	311597	3167	311707	436	90	20.6422
jpowers-varprowl	SNP	ti	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	207	0	0	0
jpowers-varprowl	SNP	ti	HG002complexvar	homalt	99.7216	99.9488	99.4954	19.7390	193364	99	193412	981	709	72.2732
jpowers-varprowl	INDEL	I1_5	HG002complexvar	*	92.7158	90.8192	94.6934	52.3150	30300	3063	30175	1691	1600	94.6186
jpowers-varprowl	INDEL	I1_5	HG002complexvar	het	94.3417	95.4478	93.2609	57.7585	17361	828	17340	1253	1221	97.4461
jpowers-varprowl	INDEL	I1_5	HG002complexvar	hetalt	0.0000	2.5492	0.0000	0.0000	44	1682	0	0	0
jpowers-varprowl	INDEL	I1_5	HG002complexvar	homalt	96.2923	95.8879	96.7001	41.8106	12895	553	12835	438	379	86.5297
jpowers-varprowl	SNP	*	HG002complexvar	*	99.4683	99.2937	99.6435	20.7160	749051	5328	749404	2681	1602	59.7538
jpowers-varprowl	SNP	*	HG002complexvar	het	99.3948	98.9553	99.8382	20.0313	460632	4863	460862	747	150	20.0803

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