PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
67901-67950 / 86044 show all
bgallagher-sentieonINDELC6_15map_l150_m1_e0*
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC6_15map_l150_m1_e0het
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC6_15map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC6_15map_l150_m1_e0homalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELD16_PLUSmap_l150_m1_e0*
90.9091
100.0000
83.3333
96.8085
1501530
0.0000
bgallagher-sentieonINDELD16_PLUSmap_l150_m1_e0het
93.3333
100.0000
87.5000
96.1722
1401420
0.0000
bgallagher-sentieonINDELD16_PLUSmap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
96.8750
10100
bgallagher-sentieonINDELD16_PLUSmap_l150_m1_e0homalt
0.0000
0.0000
99.1228
00010
0.0000
bgallagher-sentieonINDELC16_PLUSmap_l150_m1_e0*
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSmap_l150_m1_e0het
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSmap_l150_m1_e0hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSmap_l150_m1_e0homalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC1_5map_l150_m1_e0*
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC1_5map_l150_m1_e0het
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC1_5map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC1_5map_l150_m1_e0homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDEL*map_l150_m1_e0*
93.5297
98.0568
89.4022
92.0707
13122613161569
5.7692
jlack-gatkINDEL*map_l150_m1_e0het
91.0230
98.0117
84.9647
93.0437
838178421496
4.0269
jlack-gatkINDEL*map_l150_m1_e0hetalt
92.6829
90.4762
95.0000
95.2830
1921910
0.0000
jlack-gatkINDEL*map_l150_m1_e0homalt
98.5915
98.4848
98.6985
88.1613
455745563
50.0000
hfeng-pmm3SNPtvmap_l150_m1_e0*
99.3718
99.3127
99.4310
74.1360
108377510835629
14.5161
hfeng-pmm3SNPtvmap_l150_m1_e0het
99.2002
99.1218
99.2788
75.3081
6885616883505
10.0000
hfeng-pmm3SNPtvmap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
81.3084
2002000
hfeng-pmm3SNPtvmap_l150_m1_e0homalt
99.6705
99.6452
99.6957
71.7215
3932143932124
33.3333
jlack-gatkINDELD16_PLUSmap_l150_m1_e0*
84.8485
93.3333
77.7778
97.3451
1411441
25.0000
jlack-gatkINDELD16_PLUSmap_l150_m1_e0het
93.3333
100.0000
87.5000
96.9697
1401420
0.0000
jlack-gatkINDELD16_PLUSmap_l150_m1_e0hetalt
0.0000
0.0000
96.6667
01010
0.0000
jlack-gatkINDELD16_PLUSmap_l150_m1_e0homalt
0.0000
0.0000
99.1667
00011
100.0000
jlack-gatkINDELD1_5map_l150_m1_e0*
92.6175
98.6053
87.3153
91.1605
707107091034
3.8835
jlack-gatkINDELD1_5map_l150_m1_e0het
89.8669
98.9627
82.3024
91.9768
47754791034
3.8835
jlack-gatkINDELD1_5map_l150_m1_e0hetalt
92.3077
85.7143
100.0000
97.4895
61600
jlack-gatkINDELD1_5map_l150_m1_e0homalt
99.1150
98.2456
100.0000
86.7690
224422400
jlack-gatkINDELC1_5map_l150_m1_e0*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC1_5map_l150_m1_e0het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC1_5map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC1_5map_l150_m1_e0homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l150_m1_e0*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l150_m1_e0het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l150_m1_e0homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSmap_l150_m1_e0*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSmap_l150_m1_e0het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSmap_l150_m1_e0hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSmap_l150_m1_e0homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3SNPtimap_l150_m1_e0*
99.4898
99.4217
99.5579
74.0428
19598114195948714
16.0920
hfeng-pmm3SNPtimap_l150_m1_e0het
99.3161
99.2158
99.4166
75.5923
122739712269728
11.1111
hfeng-pmm3SNPtimap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
76.5625
1501500
hfeng-pmm3SNPtimap_l150_m1_e0homalt
99.7816
99.7680
99.7952
70.9268
7310177310156
40.0000
hfeng-pmm3INDELI6_15map_l150_m1_e0*
89.3617
84.0000
95.4545
93.9726
2142111
100.0000
hfeng-pmm3INDELI6_15map_l150_m1_e0het
85.7143
80.0000
92.3077
93.8095
1231211
100.0000