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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 123 124 125 126 127 128 129 130 131 ... 1720 1721 » 6301-6350 / 86044 show all
bgallagher-sentieon	SNP	tv	HG002complexvar	*	99.9492	99.9313	99.9671	22.0213	245983	169	245892	81	31	38.2716
bgallagher-sentieon	SNP	tv	HG002complexvar	het	99.9389	99.9237	99.9542	21.4883	150616	115	150540	69	21	30.4348
bgallagher-sentieon	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	35.9667	308	2	308	0	0
bgallagher-sentieon	SNP	tv	HG002complexvar	homalt	99.9663	99.9453	99.9874	22.7972	95059	52	95044	12	10	83.3333
bgallagher-sentieon	INDEL	I6_15	HG002complexvar	*	98.3311	97.7254	98.9445	57.6259	4683	109	4687	50	49	98.0000
bgallagher-sentieon	INDEL	I6_15	HG002complexvar	het	99.2727	98.8535	99.6955	59.4318	2328	27	2292	7	6	85.7143
bgallagher-sentieon	INDEL	I6_15	HG002complexvar	hetalt	96.5751	93.3769	100.0000	55.8131	1142	81	1182	0	0
bgallagher-sentieon	INDEL	I6_15	HG002complexvar	homalt	98.2186	99.9176	96.5764	55.7279	1213	1	1213	43	43	100.0000
bgallagher-sentieon	SNP	ti	HG002complexvar	*	99.9558	99.9337	99.9780	17.4939	508099	337	508035	112	53	47.3214
bgallagher-sentieon	SNP	ti	HG002complexvar	het	99.9477	99.9234	99.9720	16.9632	314525	241	314471	88	29	32.9545
bgallagher-sentieon	SNP	ti	HG002complexvar	hetalt	99.5146	99.0338	100.0000	35.3312	205	2	205	0	0
bgallagher-sentieon	SNP	ti	HG002complexvar	homalt	99.9695	99.9514	99.9876	18.3190	193369	94	193359	24	24	100.0000
astatham-gatk	SNP	tv	HG002complexvar	*	99.1122	98.2547	99.9847	22.3181	241856	4296	241769	37	21	56.7568
astatham-gatk	SNP	tv	HG002complexvar	het	98.5778	97.2116	99.9829	21.9634	146528	4203	146456	25	11	44.0000
astatham-gatk	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	35.9667	308	2	308	0	0
astatham-gatk	SNP	tv	HG002complexvar	homalt	99.9458	99.9043	99.9874	22.8056	95020	91	95005	12	10	83.3333
asubramanian-gatk	INDEL	C6_15	HG002complexvar	*	0.0000	100.0000	0.0000	75.0760	4	0	0	82	0	0.0000
asubramanian-gatk	INDEL	C6_15	HG002complexvar	het	0.0000	100.0000	0.0000	72.3577	4	0	0	68	0	0.0000
asubramanian-gatk	INDEL	C6_15	HG002complexvar	hetalt		0.0000	0.0000	66.6667	0	0	0	1	0	0.0000
asubramanian-gatk	INDEL	C6_15	HG002complexvar	homalt		0.0000	0.0000	83.7500	0	0	0	13	0	0.0000
asubramanian-gatk	INDEL	D16_PLUS	HG002complexvar	*	96.5513	95.8004	97.3142	67.2463	1574	69	1558	43	31	72.0930
asubramanian-gatk	INDEL	D16_PLUS	HG002complexvar	het	97.1610	96.5673	97.7621	69.4274	1069	38	830	19	9	47.3684
asubramanian-gatk	INDEL	D16_PLUS	HG002complexvar	hetalt	93.1106	90.2834	96.1207	48.2143	223	24	446	18	17	94.4444
asubramanian-gatk	INDEL	D16_PLUS	HG002complexvar	homalt	97.7470	97.5779	97.9167	76.2963	282	7	282	6	5	83.3333
asubramanian-gatk	INDEL	D1_5	HG002complexvar	*	99.2090	98.6948	99.7287	58.8075	32288	427	32347	88	75	85.2273
asubramanian-gatk	INDEL	D1_5	HG002complexvar	het	99.2391	98.6082	99.8781	56.4759	20476	289	20484	25	15	60.0000
asubramanian-gatk	INDEL	D1_5	HG002complexvar	hetalt	94.5568	92.7515	96.4339	73.6698	1254	98	1298	48	47	97.9167
asubramanian-gatk	INDEL	D1_5	HG002complexvar	homalt	99.7403	99.6226	99.8582	60.0860	10558	40	10565	15	13	86.6667
asubramanian-gatk	INDEL	C1_5	HG002complexvar	*	0.0000	71.4286	0.0000	75.2632	5	2	0	141	0	0.0000
asubramanian-gatk	INDEL	C1_5	HG002complexvar	het	0.0000	71.4286	0.0000	70.5128	5	2	0	115	0	0.0000
asubramanian-gatk	INDEL	C1_5	HG002complexvar	hetalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	C1_5	HG002complexvar	homalt		0.0000	0.0000	85.3107	0	0	0	26	0	0.0000
astatham-gatk	SNP	ti	HG002complexvar	*	99.2181	98.4614	99.9866	17.7102	500613	7823	500548	67	41	61.1940
astatham-gatk	SNP	ti	HG002complexvar	het	98.7599	97.5636	99.9860	17.3084	307097	7669	307042	43	17	39.5349
astatham-gatk	SNP	ti	HG002complexvar	hetalt	99.5146	99.0338	100.0000	35.3312	205	2	205	0	0
astatham-gatk	SNP	ti	HG002complexvar	homalt	99.9545	99.9214	99.9876	18.3169	193311	152	193301	24	24	100.0000
asubramanian-gatk	INDEL	*	HG002complexvar	*	98.8559	98.4299	99.2857	62.5855	75730	1208	75611	544	244	44.8529
asubramanian-gatk	INDEL	*	HG002complexvar	het	98.7623	98.2061	99.3248	58.2604	45383	829	45014	306	59	19.2810
asubramanian-gatk	INDEL	*	HG002complexvar	hetalt	95.4215	93.3225	97.6172	69.3301	3452	247	3687	90	84	93.3333
asubramanian-gatk	INDEL	*	HG002complexvar	homalt	99.4823	99.5116	99.4530	57.3903	26895	132	26910	148	101	68.2432
asubramanian-gatk	INDEL	C16_PLUS	HG002complexvar	*		0.0000	0.0000	80.4878	0	0	0	32	0	0.0000
asubramanian-gatk	INDEL	C16_PLUS	HG002complexvar	het		0.0000	0.0000	75.6522	0	0	0	28	0	0.0000
asubramanian-gatk	INDEL	C16_PLUS	HG002complexvar	hetalt		0.0000	0.0000	50.0000	0	0	0	1	0	0.0000
asubramanian-gatk	INDEL	C16_PLUS	HG002complexvar	homalt		0.0000	0.0000	93.6170	0	0	0	3	0	0.0000
anovak-vg	INDEL	C1_5	HG002complexvar	*	63.2248	71.4286	56.7114	83.4812	5	2	169	129	19	14.7287
anovak-vg	INDEL	C1_5	HG002complexvar	het	55.6456	71.4286	45.5752	82.8658	5	2	103	123	15	12.1951
anovak-vg	INDEL	C1_5	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C1_5	HG002complexvar	homalt	0.0000	0.0000	91.6667	85.1546	0	0	66	6	4	66.6667
anovak-vg	INDEL	D1_5	HG002complexvar	*	91.1523	90.0107	92.3232	54.8532	29447	3268	29789	2477	1674	67.5818
anovak-vg	INDEL	D1_5	HG002complexvar	het	92.0015	90.8693	93.1622	52.9821	18869	1896	19565	1436	834	58.0780

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