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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 118 119 120 121 122 123 124 125 126 ... 1720 1721 » 6051-6100 / 86044 show all
jli-custom	INDEL	C1_5	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	C1_5	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	D16_PLUS	HG002complexvar	*	96.9398	95.6786	98.2346	63.8971	1572	71	1558	28	21	75.0000
jli-custom	INDEL	D16_PLUS	HG002complexvar	het	97.1408	95.7543	98.5680	65.7400	1060	47	826	12	6	50.0000
jli-custom	INDEL	D16_PLUS	HG002complexvar	hetalt	94.0295	91.0931	97.1616	45.1497	225	22	445	13	13	100.0000
jli-custom	INDEL	D16_PLUS	HG002complexvar	homalt	99.1364	99.3080	98.9655	73.9209	287	2	287	3	2	66.6667
jli-custom	INDEL	D1_5	HG002complexvar	*	99.5191	99.2725	99.7668	57.5505	32477	238	32518	76	59	77.6316
jli-custom	INDEL	D1_5	HG002complexvar	het	99.7322	99.5618	99.9033	54.7904	20674	91	20667	20	6	30.0000
jli-custom	INDEL	D1_5	HG002complexvar	hetalt	93.0817	89.7929	96.6206	73.4123	1214	138	1258	44	43	97.7273
jli-custom	INDEL	D1_5	HG002complexvar	homalt	99.9010	99.9151	99.8868	59.4114	10589	9	10593	12	10	83.3333
jli-custom	SNP	ti	HG002complexvar	*	99.9464	99.9180	99.9748	17.5160	508019	417	507979	128	58	45.3125
jli-custom	SNP	ti	HG002complexvar	het	99.9353	99.9002	99.9704	16.9557	314452	314	314418	93	32	34.4086
jli-custom	SNP	ti	HG002complexvar	hetalt	99.5146	99.0338	100.0000	36.3354	205	2	205	0	0
jli-custom	SNP	ti	HG002complexvar	homalt	99.9648	99.9478	99.9819	18.3860	193362	101	193356	35	26	74.2857
jli-custom	SNP	tv	HG002complexvar	*	99.9252	99.8822	99.9683	21.9781	245862	290	245791	78	33	42.3077
jli-custom	SNP	tv	HG002complexvar	het	99.9074	99.8560	99.9588	21.3761	150514	217	150454	62	22	35.4839
jli-custom	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	36.8852	308	2	308	0	0
jli-custom	SNP	tv	HG002complexvar	homalt	99.9542	99.9254	99.9832	22.8543	95040	71	95029	16	11	68.7500
jmaeng-gatk	INDEL	C1_5	HG002complexvar	*	0.0000	85.7143	0.0000	0.0000	6	1	0	0	0
jmaeng-gatk	INDEL	C1_5	HG002complexvar	het	0.0000	85.7143	0.0000	0.0000	6	1	0	0	0
jmaeng-gatk	INDEL	C1_5	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C1_5	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002complexvar	*	0.0000	100.0000	0.0000	0.0000	4	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002complexvar	het	0.0000	100.0000	0.0000	0.0000	4	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C6_15	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	D16_PLUS	HG002complexvar	*	97.4235	97.0785	97.7709	66.8650	1595	48	1579	36	31	86.1111
jmaeng-gatk	INDEL	D16_PLUS	HG002complexvar	het	98.3585	98.5547	98.1630	68.8817	1091	16	855	16	12	75.0000
jmaeng-gatk	INDEL	D16_PLUS	HG002complexvar	hetalt	92.1538	87.8543	96.8958	47.4971	217	30	437	14	14	100.0000
jmaeng-gatk	INDEL	D16_PLUS	HG002complexvar	homalt	98.6254	99.3080	97.9522	75.9046	287	2	287	6	5	83.3333
jmaeng-gatk	INDEL	C16_PLUS	HG002complexvar	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C16_PLUS	HG002complexvar	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C16_PLUS	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C16_PLUS	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	SNP	*	HG002complexvar	*	99.9396	99.9065	99.9727	19.0201	753676	705	753565	206	91	44.1748
jli-custom	SNP	*	HG002complexvar	het	99.9263	99.8859	99.9667	18.4399	464966	531	464872	155	54	34.8387
jli-custom	SNP	*	HG002complexvar	hetalt	99.6764	99.3548	100.0000	36.8852	308	2	308	0	0
jli-custom	SNP	*	HG002complexvar	homalt	99.9614	99.9404	99.9823	19.9145	288402	172	288385	51	37	72.5490
jmaeng-gatk	INDEL	*	HG002complexvar	*	99.2404	98.8731	99.6104	58.2744	76071	867	75939	297	248	83.5017
jmaeng-gatk	INDEL	*	HG002complexvar	het	99.5676	99.3876	99.7482	58.0104	45929	283	45560	115	73	63.4783
jmaeng-gatk	INDEL	*	HG002complexvar	hetalt	91.1572	85.1041	98.1374	66.7119	3148	551	3372	64	64	100.0000
jmaeng-gatk	INDEL	*	HG002complexvar	homalt	99.7212	99.8779	99.5650	57.3567	26994	33	27007	118	111	94.0678
jlack-gatk	INDEL	C16_PLUS	HG002complexvar	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	HG002complexvar	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	D16_PLUS	HG002complexvar	*	96.5938	96.2264	96.9641	66.5839	1581	62	1565	49	36	73.4694
jlack-gatk	INDEL	D16_PLUS	HG002complexvar	het	97.0657	97.5610	96.5753	68.6359	1080	27	846	30	18	60.0000
jlack-gatk	INDEL	D16_PLUS	HG002complexvar	hetalt	92.3729	88.2591	96.8889	46.8085	218	29	436	14	14	100.0000
jlack-gatk	INDEL	D16_PLUS	HG002complexvar	homalt	98.0936	97.9239	98.2639	75.8186	283	6	283	5	4	80.0000

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