PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
60201-60250 / 86044 show all
hfeng-pmm2INDELC1_5map_l125_m1_e0*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5map_l125_m1_e0het
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5map_l125_m1_e0homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15map_l125_m1_e0*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15map_l125_m1_e0het
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15map_l125_m1_e0homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELD6_15map_l125_m1_e0*
97.8166
95.7265
100.0000
90.2012
112511200
hfeng-pmm2INDELD6_15map_l125_m1_e0het
98.4127
96.8750
100.0000
91.8954
6226200
hfeng-pmm2INDELD6_15map_l125_m1_e0hetalt
94.4444
89.4737
100.0000
85.3448
1721700
hfeng-pmm2INDELD6_15map_l125_m1_e0homalt
98.5075
97.0588
100.0000
87.4046
3313300
hfeng-pmm2INDELI16_PLUSmap_l125_m1_e0*
93.3333
93.3333
93.3333
96.1735
1411410
0.0000
hfeng-pmm2INDELI16_PLUSmap_l125_m1_e0het
94.7368
100.0000
90.0000
95.1923
90910
0.0000
hfeng-pmm2INDELI16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
90.4762
21200
hfeng-pmm2INDELI16_PLUSmap_l125_m1_e0homalt
100.0000
100.0000
100.0000
98.1595
30300
hfeng-pmm2INDELI1_5map_l125_m1_e0*
98.7982
98.9157
98.6811
85.9241
8219823112
18.1818
hfeng-pmm2INDELI1_5map_l125_m1_e0het
98.2526
98.1481
98.3573
87.3539
477947980
0.0000
hfeng-pmm2INDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
93.3852
1701700
hfeng-pmm2INDELI1_5map_l125_m1_e0homalt
99.5434
100.0000
99.0909
81.8382
327032732
66.6667
hfeng-pmm2INDELI6_15map_l125_m1_e0*
92.0000
86.7925
97.8723
91.3284
4674611
100.0000
hfeng-pmm2INDELI6_15map_l125_m1_e0het
89.2857
83.3333
96.1538
91.8239
2552511
100.0000
hfeng-pmm2INDELI6_15map_l125_m1_e0hetalt
93.3333
87.5000
100.0000
88.8889
71700
hfeng-pmm2INDELI6_15map_l125_m1_e0homalt
96.5517
93.3333
100.0000
91.3043
1411400
hfeng-pmm2SNPtimap_l125_m1_e0*
99.4105
99.4648
99.3563
71.7136
291781572917418923
12.1693
hfeng-pmm2SNPtimap_l125_m1_e0het
99.1603
99.2500
99.0708
74.2780
181291371812517014
8.2353
hfeng-pmm2SNPtimap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
71.4286
2402400
hfeng-pmm2SNPtimap_l125_m1_e0homalt
99.8234
99.8189
99.8280
66.1185
110252011025199
47.3684
hfeng-pmm2SNPtvmap_l125_m1_e0*
99.2768
99.4318
99.1223
72.3649
15925911592314116
11.3475
hfeng-pmm2SNPtvmap_l125_m1_e0het
98.9851
99.2198
98.7515
74.5484
10047791004512711
8.6614
hfeng-pmm2SNPtvmap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
77.7778
3003000
hfeng-pmm2SNPtvmap_l125_m1_e0homalt
99.7782
99.7952
99.7612
67.4839
5848125848145
35.7143
hfeng-pmm3INDEL*map_l125_m1_e0*
98.6235
98.5287
98.7186
85.1274
2076312080276
22.2222
hfeng-pmm3INDEL*map_l125_m1_e0het
98.2769
98.1273
98.4270
85.5800
1310251314213
14.2857
hfeng-pmm3INDEL*map_l125_m1_e0hetalt
97.4359
95.0000
100.0000
92.2131
3823800
hfeng-pmm3INDEL*map_l125_m1_e0homalt
99.3179
99.4536
99.1826
83.3974
728472863
50.0000
hfeng-pmm2SNP*map_l125_m1_e0*
99.3629
99.4529
99.2732
71.9477
450792484507333039
11.8182
hfeng-pmm2SNP*map_l125_m1_e0het
99.0978
99.2392
98.9567
74.3753
281762162817029725
8.4175
hfeng-pmm2SNP*map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
77.7778
3003000
hfeng-pmm2SNP*map_l125_m1_e0homalt
99.8078
99.8107
99.8048
66.6048
1687332168733314
42.4242
hfeng-pmm3INDELC16_PLUSmap_l125_m1_e0*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSmap_l125_m1_e0het
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSmap_l125_m1_e0hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSmap_l125_m1_e0homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC1_5map_l125_m1_e0*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC1_5map_l125_m1_e0het
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC1_5map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC1_5map_l125_m1_e0homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC6_15map_l125_m1_e0*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC6_15map_l125_m1_e0het
0.0000
0.0000
0.0000
00000