PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
5851-5900 / 86044 show all
rpoplin-dv42INDELI6_15HG002complexvarhetalt
95.0851
90.9240
99.6454
54.5161
1112111112444
100.0000
rpoplin-dv42INDELI6_15HG002complexvarhomalt
98.6717
97.8583
99.4987
53.9792
118826119165
83.3333
rpoplin-dv42INDELD16_PLUSHG002complexvar*
93.9813
92.4528
95.5612
63.5376
151912415077064
91.4286
rpoplin-dv42INDELD16_PLUSHG002complexvarhet
94.8719
95.3930
94.3564
62.7718
1056519535752
91.2281
rpoplin-dv42INDELD16_PLUSHG002complexvarhetalt
82.7498
72.4696
96.4286
49.8208
179682701010
100.0000
rpoplin-dv42INDELD16_PLUSHG002complexvarhomalt
98.6111
98.2699
98.9547
72.7704
284528432
66.6667
rpoplin-dv42INDELI16_PLUSHG002complexvar*
93.7832
90.4507
97.3706
62.1815
118412511853229
90.6250
rpoplin-dv42INDELI16_PLUSHG002complexvarhet
93.4882
90.9774
96.1415
59.6889
605605982422
91.6667
rpoplin-dv42INDELI16_PLUSHG002complexvarhetalt
91.5858
84.4776
100.0000
64.2417
2835229000
rpoplin-dv42INDELI16_PLUSHG002complexvarhomalt
96.5785
95.7929
97.3770
64.6991
2961329787
87.5000
rpoplin-dv42SNP*HG002complexvar*
99.9179
99.8694
99.9664
18.9545
753396985753221253214
84.5850
rpoplin-dv42SNP*HG002complexvarhet
99.8978
99.8245
99.9712
18.3215
464680817464534134101
75.3731
rpoplin-dv42SNP*HG002complexvarhetalt
99.1974
99.6774
98.7220
36.2525
309130944
100.0000
rpoplin-dv42SNP*HG002complexvarhomalt
99.9511
99.9421
99.9601
19.9304
288407167288378115109
94.7826
rpoplin-dv42SNPtiHG002complexvar*
99.9216
99.8731
99.9701
17.4429
507791645507725152130
85.5263
rpoplin-dv42SNPtiHG002complexvarhet
99.9002
99.8243
99.9761
16.8206
3142135533141527555
73.3333
rpoplin-dv42SNPtiHG002complexvarhetalt
99.0385
99.5169
98.5646
34.6875
206120633
100.0000
rpoplin-dv42SNPtiHG002complexvarhomalt
99.9574
99.9530
99.9617
18.4113
193372911933677472
97.2973
rpoplin-dv42INDELD6_15HG002complexvar*
97.1394
96.3787
97.9123
57.5494
5110192511210999
90.8257
rpoplin-dv42INDELD6_15HG002complexvarhet
97.7459
97.7564
97.7354
59.1947
30507030217062
88.5714
rpoplin-dv42INDELD6_15HG002complexvarhetalt
92.5754
89.1412
96.2848
45.0369
9031109333635
97.2222
rpoplin-dv42INDELD6_15HG002complexvarhomalt
99.3561
98.9735
99.7416
60.7903
115712115832
66.6667
qzeng-customINDELI16_PLUSHG002complexvar*
86.4583
83.8044
89.2857
60.9632
1097212110013251
38.6364
qzeng-customINDELI16_PLUSHG002complexvarhet
88.3834
86.1654
90.7186
58.7909
573926066211
17.7419
qzeng-customINDELI16_PLUSHG002complexvarhetalt
80.5997
68.6567
97.5728
58.5513
23010520155
100.0000
qzeng-customINDELI16_PLUSHG002complexvarhomalt
87.9947
95.1456
81.8436
65.5106
294152936535
53.8462
qzeng-customINDELI1_5HG002complexvar*
98.4325
97.7100
99.1658
52.3895
3259976432572274135
49.2701
qzeng-customINDELI1_5HG002complexvarhet
98.6121
98.1362
99.0926
55.1360
178503391867517170
40.9357
qzeng-customINDELI1_5HG002complexvarhetalt
90.5910
83.2561
99.3432
68.2647
143728960544
100.0000
qzeng-customINDELI1_5HG002complexvarhomalt
99.1245
98.9887
99.2607
46.5706
13312136132929961
61.6162
qzeng-customSNPtiHG002complexvar*
99.1315
98.4529
99.8194
18.2769
5005717866493623893400
44.7928
qzeng-customSNPtiHG002complexvarhet
99.0720
98.3388
99.8162
18.0479
3095375229307433566153
27.0318
qzeng-customSNPtiHG002complexvarhetalt
97.0149
94.2029
100.0000
39.1447
1951218500
qzeng-customSNPtiHG002complexvarhomalt
99.2303
98.6432
99.8245
18.6252
1908392625186005327247
75.5352
qzeng-customSNPtvHG002complexvar*
99.0948
98.4189
99.7800
23.2771
2422633892238613526243
46.1977
qzeng-customSNPtvHG002complexvarhet
99.0228
98.2997
99.7567
23.1864
1481712563146790358101
28.2123
qzeng-customSNPtvHG002complexvarhetalt
97.3511
95.1613
99.6441
38.9130
2951528011
100.0000
qzeng-customSNPtvHG002complexvarhomalt
99.2146
98.6185
99.8179
23.3623
93797131491543167141
84.4311
raldana-dualsentieonINDEL*HG002complexvar*
98.9594
98.2323
99.6974
57.2556
75578136075441229196
85.5895
raldana-dualsentieonINDEL*HG002complexvarhet
98.7829
97.8101
99.7752
56.2974
4520010124483110172
71.2871
raldana-dualsentieonINDEL*HG002complexvarhetalt
95.3862
91.2949
99.8613
67.7087
3377322360055
100.0000
raldana-dualsentieonINDEL*HG002complexvarhomalt
99.7249
99.9038
99.5467
56.9673
270012627010123119
96.7480
qzeng-customSNP*HG002complexvar*
99.1204
98.4430
99.8072
19.9398
742639117467238431398631
45.1359
qzeng-customSNP*HG002complexvarhet
99.0563
98.3261
99.7975
19.7489
4577087792449025911250
27.4424
qzeng-customSNP*HG002complexvarhetalt
97.3511
95.1613
99.6441
38.9130
2951528011
100.0000
qzeng-customSNP*HG002complexvarhomalt
99.2256
98.6350
99.8233
20.2251
2846363939274538486380
78.1893
qzeng-customINDELD6_15HG002complexvar*
93.7910
94.8133
92.7906
55.1605
50272755277410156
38.0488
qzeng-customINDELD6_15HG002complexvarhet
94.9295
96.7628
93.1643
54.7892
30191014116302103
34.1060
qzeng-customINDELD6_15HG002complexvarhetalt
85.8835
100.0000
870143000
qzeng-customINDELD6_15HG002complexvarhomalt
94.3279
97.3482
91.4894
56.3918
113831116110853
49.0741