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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1136 1137 1138 1139 1140 1141 1142 1143 1144 ... 1720 1721 » 56951-57000 / 86044 show all
cchapple-custom	SNP	tv	map_l100_m2_e1	hetalt	0.0000	100.0000	0.0000	0.0000	43	0	0	0	0
cchapple-custom	SNP	tv	map_l100_m2_e1	homalt	98.7868	97.6027	100.0000	60.2358	9079	223	9073	0	0
ciseli-custom	INDEL	D1_5	map_l100_m2_e1	*	79.9331	76.5859	83.5863	88.3030	1485	454	1487	292	143	48.9726
ciseli-custom	INDEL	D1_5	map_l100_m2_e1	het	79.5099	74.9211	84.6975	89.9093	950	318	952	172	40	23.2558
ciseli-custom	INDEL	D1_5	map_l100_m2_e1	hetalt	0.0000	3.9216	0.0000	0.0000	2	49	0	0	0
ciseli-custom	INDEL	D1_5	map_l100_m2_e1	homalt	83.7687	85.9677	81.6794	83.9066	533	87	535	120	103	85.8333
ciseli-custom	INDEL	C1_5	map_l100_m2_e1	*	0.0000	0.0000	8.6957	97.5162	0	0	2	21	4	19.0476
ciseli-custom	INDEL	C1_5	map_l100_m2_e1	het	0.0000	0.0000	33.3333	99.1404	0	0	1	2	0	0.0000
ciseli-custom	INDEL	C1_5	map_l100_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l100_m2_e1	homalt	0.0000	0.0000	5.0000	96.5338	0	0	1	19	4	21.0526
ciseli-custom	INDEL	*	map_l100_m2_e1	*	70.6710	66.2407	75.7364	88.0952	2488	1268	2494	799	531	66.4581
ciseli-custom	INDEL	*	map_l100_m2_e1	het	73.2415	70.9774	75.6549	89.0075	1663	680	1675	539	319	59.1837
ciseli-custom	INDEL	*	map_l100_m2_e1	hetalt	0.0000	4.5455	0.0000	0.0000	6	126	0	0	0
ciseli-custom	INDEL	*	map_l100_m2_e1	homalt	69.4068	63.9344	75.9036	85.6497	819	462	819	260	212	81.5385
ciseli-custom	INDEL	C16_PLUS	map_l100_m2_e1	*		0.0000	0.0000	98.6111	0	0	0	1	0	0.0000
ciseli-custom	INDEL	C16_PLUS	map_l100_m2_e1	het		0.0000	0.0000	94.7368	0	0	0	1	0	0.0000
ciseli-custom	INDEL	C16_PLUS	map_l100_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C16_PLUS	map_l100_m2_e1	homalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	map_l100_m2_e1	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	map_l100_m2_e1	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	map_l100_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	map_l100_m2_e1	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	*	map_l100_m2_e1	*	97.0874	98.3759	95.8323	89.0990	3695	61	3702	161	20	12.4224
ckim-gatk	INDEL	*	map_l100_m2_e1	het	96.1964	98.5915	93.9148	90.4620	2310	33	2315	150	14	9.3333
ckim-gatk	INDEL	*	map_l100_m2_e1	hetalt	92.6829	86.3636	100.0000	87.5536	114	18	116	0	0
ckim-gatk	INDEL	*	map_l100_m2_e1	homalt	99.1806	99.2194	99.1420	85.1980	1271	10	1271	11	6	54.5455
ckim-gatk	INDEL	C16_PLUS	map_l100_m2_e1	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C16_PLUS	map_l100_m2_e1	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C16_PLUS	map_l100_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C16_PLUS	map_l100_m2_e1	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	ti	map_l100_m2_e1	*	98.6777	99.2968	98.0664	68.9837	49137	348	49145	969	108	11.1455
ckim-dragen	SNP	ti	map_l100_m2_e1	het	98.1227	99.2603	97.0108	73.2091	30731	229	30734	947	88	9.2925
ckim-dragen	SNP	ti	map_l100_m2_e1	hetalt	100.0000	100.0000	100.0000	77.3723	31	0	31	0	0
ckim-dragen	SNP	ti	map_l100_m2_e1	homalt	99.6178	99.3565	99.8804	57.3860	18375	119	18380	22	20	90.9091
ckim-dragen	INDEL	I6_15	map_l100_m2_e1	*	96.9697	96.5517	97.3913	89.0580	112	4	112	3	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m2_e1	het	96.7213	96.7213	96.7213	90.1135	59	2	59	2	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m2_e1	hetalt	95.2381	90.9091	100.0000	83.1933	20	2	20	0	0
ckim-dragen	INDEL	I6_15	map_l100_m2_e1	homalt	98.5075	100.0000	97.0588	89.2063	33	0	33	1	0	0.0000
ckim-gatk	INDEL	C6_15	map_l100_m2_e1	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	map_l100_m2_e1	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	map_l100_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	map_l100_m2_e1	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	tv	map_l100_m2_e1	*	98.6522	99.2920	98.0206	71.3656	25104	179	25107	507	45	8.8757
ckim-dragen	SNP	tv	map_l100_m2_e1	het	98.0614	99.1655	96.9816	75.2723	15805	133	15808	492	32	6.5041
ckim-dragen	SNP	tv	map_l100_m2_e1	hetalt	98.8235	97.6744	100.0000	80.8219	42	1	42	0	0
ckim-dragen	SNP	tv	map_l100_m2_e1	homalt	99.6770	99.5162	99.8382	60.2316	9257	45	9257	15	13	86.6667
ckim-dragen	SNP	*	map_l100_m2_e1	*	98.6686	99.2949	98.0501	69.8284	74210	527	74221	1476	153	10.3659
ckim-dragen	SNP	*	map_l100_m2_e1	het	98.1019	99.2281	97.0009	73.9476	46536	362	46542	1439	120	8.3391
ckim-dragen	SNP	*	map_l100_m2_e1	hetalt	98.8235	97.6744	100.0000	80.8219	42	1	42	0	0
ckim-dragen	SNP	*	map_l100_m2_e1	homalt	99.6376	99.4100	99.8663	58.3837	27632	164	27637	37	33	89.1892

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