PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
55951-56000 / 86044 show all
bgallagher-sentieonINDELI6_15map_l100_m2_e0hetalt
95.2381
90.9091
100.0000
82.3009
2022000
bgallagher-sentieonINDELI6_15map_l100_m2_e0homalt
98.4615
96.9697
100.0000
89.9371
3213200
bgallagher-sentieonSNP*map_l100_m2_e0*
99.4275
99.5674
99.2880
67.0766
736443207363352881
15.3409
bgallagher-sentieonSNP*map_l100_m2_e0het
99.2145
99.5129
98.9179
70.0977
461732264616250563
12.4752
bgallagher-sentieonSNP*map_l100_m2_e0hetalt
97.5610
95.2381
100.0000
72.7891
4024000
bgallagher-sentieonSNP*map_l100_m2_e0homalt
99.7908
99.6657
99.9162
60.2352
2743192274312318
78.2609
bgallagher-sentieonINDELD6_15map_l100_m2_e0*
96.2121
96.2121
96.2121
87.5589
25410254102
20.0000
bgallagher-sentieonINDELD6_15map_l100_m2_e0het
95.5224
97.7099
93.4307
90.1722
128312892
22.2222
bgallagher-sentieonINDELD6_15map_l100_m2_e0hetalt
95.4545
92.6471
98.4375
72.7660
6356310
0.0000
bgallagher-sentieonINDELD6_15map_l100_m2_e0homalt
98.4375
96.9231
100.0000
87.2211
6326300
bgallagher-sentieonINDELI16_PLUSmap_l100_m2_e0*
90.5660
92.3077
88.8889
96.0294
2422430
0.0000
bgallagher-sentieonINDELI16_PLUSmap_l100_m2_e0het
94.4444
94.4444
94.4444
95.1351
1711710
0.0000
bgallagher-sentieonINDELI16_PLUSmap_l100_m2_e0hetalt
80.0000
66.6667
100.0000
93.5484
21200
bgallagher-sentieonINDELI16_PLUSmap_l100_m2_e0homalt
83.3333
100.0000
71.4286
97.4910
50520
0.0000
bgallagher-sentieonINDELD1_5map_l100_m2_e0*
98.8043
99.1123
98.4982
84.6307
1898171902296
20.6897
bgallagher-sentieonINDELD1_5map_l100_m2_e0het
98.5784
99.2038
97.9608
84.7707
1246101249264
15.3846
bgallagher-sentieonINDELD1_5map_l100_m2_e0hetalt
94.6463
91.6667
97.8261
89.7092
4444510
0.0000
bgallagher-sentieonINDELD1_5map_l100_m2_e0homalt
99.5905
99.5090
99.6721
83.7116
608360822
100.0000
bgallagher-sentieonINDEL*map_l100_m2_e0*
98.3285
98.6461
98.0129
85.9953
36435036507417
22.9730
bgallagher-sentieonINDEL*map_l100_m2_e0het
98.0419
98.6129
97.4776
86.6167
22753222805911
18.6441
bgallagher-sentieonINDEL*map_l100_m2_e0hetalt
95.0068
91.2000
99.1453
86.4111
1141111610
0.0000
bgallagher-sentieonINDEL*map_l100_m2_e0homalt
99.1696
99.4449
98.8959
84.6359
125471254146
42.8571
bgallagher-sentieonINDELC16_PLUSmap_l100_m2_e0*
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSmap_l100_m2_e0het
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSmap_l100_m2_e0hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSmap_l100_m2_e0homalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC6_15map_l100_m2_e0*
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC6_15map_l100_m2_e0het
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC6_15map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC6_15map_l100_m2_e0homalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELD16_PLUSmap_l100_m2_e0*
87.3684
92.2222
83.0000
94.8823
83783174
23.5294
bgallagher-sentieonINDELD16_PLUSmap_l100_m2_e0het
86.3481
95.8333
78.5714
95.8854
46244124
33.3333
bgallagher-sentieonINDELD16_PLUSmap_l100_m2_e0hetalt
91.6667
84.6154
100.0000
79.3103
2242400
bgallagher-sentieonINDELD16_PLUSmap_l100_m2_e0homalt
83.3333
93.7500
75.0000
95.8071
1511550
0.0000
bgallagher-sentieonINDELC1_5map_l100_m2_e0*
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC1_5map_l100_m2_e0het
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC1_5map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC1_5map_l100_m2_e0homalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC1_5map_l100_m2_e1*
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC1_5map_l100_m2_e1het
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC1_5map_l100_m2_e1hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC1_5map_l100_m2_e1homalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELD1_5map_l100_m2_e1*
98.8190
99.1233
98.5166
84.7206
1922171926296
20.6897
bgallagher-sentieonINDELD1_5map_l100_m2_e1het
98.5917
99.2114
97.9798
84.8890
1258101261264
15.3846
bgallagher-sentieonINDELD1_5map_l100_m2_e1hetalt
94.9695
92.1569
97.9592
89.3478
4744810
0.0000
bgallagher-sentieonINDELD1_5map_l100_m2_e1homalt
99.5964
99.5161
99.6769
83.7873
617361722
100.0000
bgallagher-sentieonINDELD6_15map_l100_m2_e1*
96.1749
96.0000
96.3504
87.4023
26411264102
20.0000
bgallagher-sentieonINDELD6_15map_l100_m2_e1het
95.6522
97.7778
93.6170
90.0774
132313292
22.2222
bgallagher-sentieonINDELD6_15map_l100_m2_e1hetalt
95.0355
91.7808
98.5294
72.6908
6766710
0.0000
bgallagher-sentieonINDELD6_15map_l100_m2_e1homalt
98.4848
97.0149
100.0000
87.1287
6526500