PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
55501-55550 / 86044 show all
hfeng-pmm2INDELI16_PLUSmap_l100_m2_e0het
94.4444
94.4444
94.4444
94.6746
1711710
0.0000
hfeng-pmm2INDELI16_PLUSmap_l100_m2_e0hetalt
80.0000
66.6667
100.0000
94.4444
21200
hfeng-pmm2INDELI16_PLUSmap_l100_m2_e0homalt
90.9091
100.0000
83.3333
97.4026
50510
0.0000
hfeng-pmm2INDELI1_5map_l100_m2_e0*
98.9042
98.8304
98.9781
84.3732
1352161356144
28.5714
hfeng-pmm2INDELI1_5map_l100_m2_e0het
98.5481
98.2346
98.8636
85.7988
7791478390
0.0000
hfeng-pmm2INDELI1_5map_l100_m2_e0hetalt
97.6744
95.4545
100.0000
89.7810
4224200
hfeng-pmm2INDELI1_5map_l100_m2_e0homalt
99.5314
100.0000
99.0672
80.7125
531053154
80.0000
hfeng-pmm2INDELD1_5map_l100_m2_e0*
98.7266
99.0601
98.3954
83.7702
1897181901314
12.9032
hfeng-pmm2INDELD1_5map_l100_m2_e0het
98.4217
99.1242
97.7291
84.1426
1245111248292
6.8966
hfeng-pmm2INDELD1_5map_l100_m2_e0hetalt
95.6522
91.6667
100.0000
91.1417
4444500
hfeng-pmm2INDELD1_5map_l100_m2_e0homalt
99.5905
99.5090
99.6721
81.7529
608360822
100.0000
hfeng-pmm2INDELC16_PLUSmap_l100_m2_e0*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC16_PLUSmap_l100_m2_e0het
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC16_PLUSmap_l100_m2_e0hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC16_PLUSmap_l100_m2_e0homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5map_l100_m2_e0*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELD16_PLUSmap_l100_m2_e0*
88.2979
92.2222
84.6939
93.9840
83783153
20.0000
hfeng-pmm2INDELD16_PLUSmap_l100_m2_e0het
88.0766
95.8333
81.4815
95.2590
46244103
30.0000
hfeng-pmm2INDELD16_PLUSmap_l100_m2_e0hetalt
91.6667
84.6154
100.0000
79.3103
2242400
hfeng-pmm2INDELD16_PLUSmap_l100_m2_e0homalt
83.3333
93.7500
75.0000
94.6524
1511550
0.0000
hfeng-pmm2SNP*map_l100_m2_e0*
99.5209
99.5633
99.4785
67.6209
736413237363038647
12.1762
hfeng-pmm2SNP*map_l100_m2_e0het
99.3150
99.3793
99.2508
69.6789
461112884610034828
8.0460
hfeng-pmm2SNP*map_l100_m2_e0hetalt
100.0000
100.0000
100.0000
78.8945
4204200
hfeng-pmm2SNP*map_l100_m2_e0homalt
99.8674
99.8728
99.8619
63.3992
2748835274883819
50.0000
hfeng-pmm3INDELC16_PLUSmap_l100_m2_e0*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSmap_l100_m2_e0het
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSmap_l100_m2_e0hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSmap_l100_m2_e0homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC1_5map_l100_m2_e0*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC1_5map_l100_m2_e0het
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC1_5map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC1_5map_l100_m2_e0homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC6_15map_l100_m2_e0*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC6_15map_l100_m2_e0het
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC6_15map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC6_15map_l100_m2_e0homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDEL*map_l100_m2_e0*
98.6017
98.2670
98.9388
83.3913
3629643636399
23.0769
hfeng-pmm3INDEL*map_l100_m2_e0het
98.4803
98.2228
98.7391
83.7628
2266412271295
17.2414
hfeng-pmm3INDEL*map_l100_m2_e0hetalt
94.0678
88.8000
100.0000
87.3176
1111411300
hfeng-pmm3INDEL*map_l100_m2_e0homalt
99.2469
99.2863
99.2076
82.1525
125291252104
40.0000
hfeng-pmm2INDELI6_15map_l100_m2_e0*
96.0000
93.1034
99.0826
87.7390
108810811
100.0000
hfeng-pmm2INDELI6_15map_l100_m2_e0het
94.9153
91.8033
98.2456
88.2231
5655611
100.0000
hfeng-pmm2INDELI6_15map_l100_m2_e0hetalt
95.2381
90.9091
100.0000
84.7328
2022000
hfeng-pmm2INDELI6_15map_l100_m2_e0homalt
98.4615
96.9697
100.0000
88.3212
3213200
hfeng-pmm2SNPtimap_l100_m2_e0*
99.5384
99.5445
99.5323
66.9341
487382234873122930
13.1004
hfeng-pmm2SNPtimap_l100_m2_e0het
99.3370
99.3436
99.3305
69.0739
304212013041420516
7.8049
hfeng-pmm2SNPtimap_l100_m2_e0hetalt
100.0000
100.0000
100.0000
75.8065
3003000
hfeng-pmm2SNPtimap_l100_m2_e0homalt
99.8744
99.8798
99.8689
62.5825
1828722182872414
58.3333
hfeng-pmm2SNPtvmap_l100_m2_e0*
99.4872
99.6005
99.3742
68.8945
249331002492915717
10.8280
hfeng-pmm2SNPtvmap_l100_m2_e0het
99.2723
99.4486
99.0966
70.7844
15690871568614312
8.3916