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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 106 107 108 109 110 111 112 113 114 ... 1720 1721 » 5451-5500 / 86044 show all
ckim-dragen	INDEL	D1_5	HG002complexvar	hetalt	94.4661	92.3817	96.6468	71.8658	1249	103	1297	45	45	100.0000
ckim-dragen	INDEL	D1_5	HG002complexvar	homalt	99.7544	99.8207	99.6881	60.4958	10579	19	10549	33	30	90.9091
ckim-dragen	INDEL	C1_5	HG002complexvar	*	75.0000	85.7143	66.6667	74.4681	6	1	8	4	4	100.0000
ckim-dragen	INDEL	C1_5	HG002complexvar	het	0.0000	85.7143	0.0000	0.0000	6	1	0	0	0
ckim-dragen	INDEL	C1_5	HG002complexvar	hetalt	0.0000	0.0000	66.6667	74.4681	0	0	8	4	4	100.0000
ckim-dragen	INDEL	C1_5	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	D16_PLUS	HG002complexvar	*	97.0671	97.2002	96.9344	67.2029	1597	46	1581	50	37	74.0000
ckim-dragen	INDEL	D16_PLUS	HG002complexvar	het	98.4311	98.3740	98.4884	69.6006	1089	18	847	13	2	15.3846
ckim-dragen	INDEL	D16_PLUS	HG002complexvar	hetalt	92.9712	89.4737	96.7532	47.3804	221	26	447	15	15	100.0000
ckim-dragen	INDEL	D16_PLUS	HG002complexvar	homalt	95.9866	99.3080	92.8803	75.5924	287	2	287	22	20	90.9091
cchapple-custom	INDEL	D1_5	HG002complexvar	*	99.2131	98.7865	99.6433	53.2355	32318	397	31288	112	96	85.7143
cchapple-custom	INDEL	D1_5	HG002complexvar	het	99.3604	99.0657	99.6568	53.2015	20571	194	21196	73	60	82.1918
cchapple-custom	INDEL	D1_5	HG002complexvar	hetalt	0.0000	88.4615	0.0000	0.0000	1196	156	0	0	0
cchapple-custom	INDEL	D1_5	HG002complexvar	homalt	99.5858	99.5565	99.6150	53.3069	10551	47	10092	39	36	92.3077
cchapple-custom	INDEL	I1_5	HG002complexvar	*	99.1800	98.7291	99.6350	52.8581	32939	424	31939	117	104	88.8889
cchapple-custom	INDEL	I1_5	HG002complexvar	het	99.2036	98.7960	99.6147	56.4110	17970	219	19130	74	62	83.7838
cchapple-custom	INDEL	I1_5	HG002complexvar	hetalt	0.0000	92.6419	0.0000	0.0000	1599	127	0	0	0
cchapple-custom	INDEL	I1_5	HG002complexvar	homalt	99.5426	99.4200	99.6654	46.3203	13370	78	12809	43	42	97.6744
cchapple-custom	INDEL	I6_15	HG002complexvar	*	97.5496	96.4942	98.6284	54.8042	4624	168	4746	66	60	90.9091
cchapple-custom	INDEL	I6_15	HG002complexvar	het	98.1734	97.1975	99.1692	56.5725	2289	66	3581	30	25	83.3333
cchapple-custom	INDEL	I6_15	HG002complexvar	hetalt	0.0000	92.3957	0.0000	0.0000	1130	93	0	0	0
cchapple-custom	INDEL	I6_15	HG002complexvar	homalt	98.1176	99.2586	97.0025	48.4991	1205	9	1165	36	35	97.2222
cchapple-custom	SNP	*	HG002complexvar	*	99.8003	99.6796	99.9214	18.6735	751964	2417	749599	590	426	72.2034
cchapple-custom	SNP	*	HG002complexvar	het	99.7839	99.6872	99.8808	18.7433	464041	1456	463256	553	394	71.2477
cchapple-custom	SNP	*	HG002complexvar	hetalt	0.0000	99.0323	0.0000	0.0000	307	3	0	0	0
cchapple-custom	SNP	*	HG002complexvar	homalt	99.8273	99.6680	99.9871	18.5601	287616	958	286343	37	32	86.4865
cchapple-custom	SNP	ti	HG002complexvar	*	99.8096	99.6932	99.9263	17.3694	506876	1560	505502	373	274	73.4584
cchapple-custom	SNP	ti	HG002complexvar	het	99.7945	99.6988	99.8903	17.3501	313818	948	313318	344	249	72.3837
cchapple-custom	SNP	ti	HG002complexvar	hetalt	0.0000	98.5507	0.0000	0.0000	204	3	0	0	0
cchapple-custom	SNP	ti	HG002complexvar	homalt	99.8348	99.6852	99.9849	17.4009	192854	609	192184	29	25	86.2069
cchapple-custom	INDEL	I16_PLUS	HG002complexvar	*	97.1576	96.1803	98.1550	66.7729	1259	50	1330	25	18	72.0000
cchapple-custom	INDEL	I16_PLUS	HG002complexvar	het	97.6379	96.5414	98.7595	67.9804	642	23	1035	13	7	53.8462
cchapple-custom	INDEL	I16_PLUS	HG002complexvar	hetalt	0.0000	91.9403	0.0000	0.0000	308	27	0	0	0
cchapple-custom	INDEL	I16_PLUS	HG002complexvar	homalt	98.0066	100.0000	96.0912	61.8634	309	0	295	12	11	91.6667
cchapple-custom	INDEL	D16_PLUS	HG002complexvar	*	94.5754	92.5746	96.6646	59.3502	1521	122	1536	53	45	84.9057
cchapple-custom	INDEL	D16_PLUS	HG002complexvar	het	95.3100	93.9476	96.7125	59.3663	1040	67	1265	43	36	83.7209
cchapple-custom	INDEL	D16_PLUS	HG002complexvar	hetalt	0.0000	82.1862	0.0000	0.0000	203	44	0	0	0
cchapple-custom	INDEL	D16_PLUS	HG002complexvar	homalt	96.3174	96.1938	96.4413	59.2754	278	11	271	10	9	90.0000
cchapple-custom	INDEL	D6_15	HG002complexvar	*	96.6422	95.3791	97.9391	52.4803	5057	245	5085	107	98	91.5888
cchapple-custom	INDEL	D6_15	HG002complexvar	het	97.1892	96.5064	97.8818	52.6751	3011	109	3974	86	77	89.5349
cchapple-custom	INDEL	D6_15	HG002complexvar	hetalt	0.0000	87.4630	0.0000	0.0000	886	127	0	0	0
cchapple-custom	INDEL	D6_15	HG002complexvar	homalt	98.6845	99.2301	98.1449	51.7682	1160	9	1111	21	21	100.0000
ciseli-custom	INDEL	I1_5	HG002complexvar	*	86.2012	84.5873	87.8779	52.9140	28220	5142	27874	3845	2974	77.3472
ciseli-custom	INDEL	I1_5	HG002complexvar	het	88.5454	89.7735	87.3504	57.1664	16328	1860	16352	2368	1692	71.4527
ciseli-custom	INDEL	I1_5	HG002complexvar	hetalt	0.0000	7.3001	0.0000	0.0000	126	1600	0	0	0
ciseli-custom	INDEL	I1_5	HG002complexvar	homalt	88.0614	87.4926	88.6376	45.0592	11766	1682	11522	1477	1282	86.7976
ciseli-custom	SNP	ti	HG002complexvar	*	96.3915	97.0905	95.7026	18.7897	493644	14793	488642	21942	5540	25.2484
ciseli-custom	SNP	ti	HG002complexvar	het	96.3296	95.9112	96.7516	18.3708	301896	12870	299422	10053	353	3.5114
ciseli-custom	SNP	ti	HG002complexvar	hetalt	68.4524	55.5556	89.1473	41.3636	115	92	115	14	9	64.2857
ciseli-custom	SNP	ti	HG002complexvar	homalt	96.5088	99.0536	94.0915	19.4065	191633	1831	189105	11875	5178	43.6042

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