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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1091 1092 1093 1094 1095 1096 1097 1098 1099 ... 1720 1721 » 54701-54750 / 86044 show all
ckim-dragen	SNP	ti	map_l100_m2_e0	*	98.6738	99.2954	98.0599	68.9474	48616	345	48624	962	107	11.1227
ckim-dragen	SNP	ti	map_l100_m2_e0	het	98.1149	99.2554	97.0004	73.1660	30394	228	30397	940	87	9.2553
ckim-dragen	SNP	ti	map_l100_m2_e0	hetalt	100.0000	100.0000	100.0000	77.9412	30	0	30	0	0
ckim-dragen	SNP	ti	map_l100_m2_e0	homalt	99.6194	99.3610	99.8792	57.3994	18192	117	18197	22	20	90.9091
ckim-dragen	INDEL	I6_15	map_l100_m2_e0	*	96.9697	96.5517	97.3913	88.8023	112	4	112	3	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m2_e0	het	96.7213	96.7213	96.7213	89.9007	59	2	59	2	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m2_e0	hetalt	95.2381	90.9091	100.0000	82.6087	20	2	20	0	0
ckim-dragen	INDEL	I6_15	map_l100_m2_e0	homalt	98.5075	100.0000	97.0588	88.9610	33	0	33	1	0	0.0000
ckim-gatk	INDEL	*	map_l100_m2_e0	*	97.0660	98.4024	95.7654	89.0665	3634	59	3641	161	20	12.4224
ckim-gatk	INDEL	*	map_l100_m2_e0	het	96.1386	98.5696	93.8246	90.4219	2274	33	2279	150	14	9.3333
ckim-gatk	INDEL	*	map_l100_m2_e0	hetalt	93.1624	87.2000	100.0000	87.7076	109	16	111	0	0
ckim-gatk	INDEL	*	map_l100_m2_e0	homalt	99.1677	99.2070	99.1284	85.1721	1251	10	1251	11	6	54.5455
ckim-gatk	INDEL	C16_PLUS	map_l100_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C16_PLUS	map_l100_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C16_PLUS	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C16_PLUS	map_l100_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	tv	map_l100_m2_e0	*	98.6448	99.2929	98.0051	71.3118	24856	177	24859	506	45	8.8933
ckim-dragen	SNP	tv	map_l100_m2_e0	het	98.0513	99.1697	96.9579	75.2085	15646	131	15649	491	32	6.5173
ckim-dragen	SNP	tv	map_l100_m2_e0	hetalt	98.7952	97.6190	100.0000	81.1927	41	1	41	0	0
ckim-dragen	SNP	tv	map_l100_m2_e0	homalt	99.6739	99.5116	99.8367	60.2338	9169	45	9169	15	13	86.6667
ckim-dragen	SNP	*	map_l100_m2_e0	*	98.6634	99.2943	98.0406	69.7855	73442	522	73453	1468	152	10.3542
ckim-dragen	SNP	*	map_l100_m2_e0	het	98.0933	99.2263	96.9859	73.8971	46040	359	46046	1431	119	8.3159
ckim-dragen	SNP	*	map_l100_m2_e0	hetalt	98.7952	97.6190	100.0000	81.1927	41	1	41	0	0
ckim-dragen	SNP	*	map_l100_m2_e0	homalt	99.6377	99.4114	99.8650	58.3933	27361	162	27366	37	33	89.1892
ckim-gatk	INDEL	C6_15	map_l100_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	map_l100_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	map_l100_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	map_l100_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	map_l100_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	map_l100_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	SNP	tv	map_l100_m2_e0	*	83.0120	79.3073	87.0798	73.4407	19853	5180	19842	2944	713	24.2188
ciseli-custom	SNP	tv	map_l100_m2_e0	het	79.2677	74.3804	84.8423	77.0207	11735	4042	11732	2096	75	3.5782
ciseli-custom	SNP	tv	map_l100_m2_e0	hetalt	72.0000	64.2857	81.8182	76.5957	27	15	27	6	5	83.3333
ciseli-custom	SNP	tv	map_l100_m2_e0	homalt	89.1677	87.8120	90.5658	64.9670	8091	1123	8083	842	633	75.1781
ciseli-custom	SNP	ti	map_l100_m2_e0	*	86.2627	83.2663	89.4829	71.0430	40768	8193	40704	4784	1327	27.7383
ciseli-custom	SNP	ti	map_l100_m2_e0	het	83.2254	78.7865	88.1944	75.0570	24126	6496	24100	3226	86	2.6658
ciseli-custom	SNP	ti	map_l100_m2_e0	hetalt	76.3636	70.0000	84.0000	72.2222	21	9	21	4	4	100.0000
ciseli-custom	SNP	ti	map_l100_m2_e0	homalt	91.1050	90.7805	91.4319	61.7718	16621	1688	16583	1554	1237	79.6010
ciseli-custom	SNP	*	map_l100_m2_e0	*	85.1771	81.9318	88.6900	71.8362	60600	13364	60413	7704	2033	26.3889
ciseli-custom	SNP	*	map_l100_m2_e0	het	81.8850	77.2883	87.0629	75.7023	35861	10538	35782	5317	161	3.0280
ciseli-custom	SNP	*	map_l100_m2_e0	hetalt	72.0000	64.2857	81.8182	76.5957	27	15	27	6	5	83.3333
ciseli-custom	SNP	*	map_l100_m2_e0	homalt	90.4763	89.7867	91.1766	62.8157	24712	2811	24604	2381	1867	78.4124
ciseli-custom	INDEL	D6_15	map_l100_m2_e0	*	54.3651	51.8939	57.0833	88.8786	137	127	137	103	60	58.2524
ciseli-custom	INDEL	D6_15	map_l100_m2_e0	het	63.7616	64.8855	62.6761	90.4313	85	46	89	53	13	24.5283
ciseli-custom	INDEL	D6_15	map_l100_m2_e0	hetalt	0.0000	4.4118	0.0000	0.0000	3	65	0	0	0
ciseli-custom	INDEL	D6_15	map_l100_m2_e0	homalt	59.3789	75.3846	48.9796	85.4599	49	16	48	50	47	94.0000
ciseli-custom	INDEL	I1_5	map_l100_m2_e0	*	63.6732	58.1871	70.3014	85.8912	796	572	793	335	286	85.3731
ciseli-custom	INDEL	I1_5	map_l100_m2_e0	het	69.5601	72.7617	66.6284	86.3856	577	216	581	291	251	86.2543

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