PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
5301-5350 / 86044 show all
ciseli-customINDEL*func_cds*
84.1100
83.3708
84.8624
37.1758
371743706630
45.4545
ciseli-customINDEL*func_cdshet
79.1762
80.8411
77.5785
43.6869
173411735020
40.0000
ciseli-customINDEL*func_cdshetalt
0.0000
0.0000
0.0000
05000
ciseli-customINDEL*func_cdshomalt
89.9834
87.6106
92.4883
28.5235
198281971610
62.5000
ciseli-customINDEL*HG002complexvar*
81.0665
80.3871
81.7575
57.5412
618451508961574137398055
58.6287
ciseli-customINDEL*HG002complexvarhet
83.6520
81.8863
85.4955
58.3237
3783883703801964502732
42.3566
ciseli-customINDEL*HG002complexvarhetalt
0.0000
5.8394
0.0000
0.0000
2163483000
ciseli-customINDEL*HG002complexvarhomalt
81.7869
88.0268
76.3731
56.3608
2379132362355572875323
73.0479
ciseli-customINDELC6_15HG002complexvar*
35.4067
50.0000
27.4074
91.9258
22379837
37.7551
ciseli-customINDELC6_15HG002complexvarhet
56.6038
50.0000
65.2174
92.6045
221580
0.0000
ciseli-customINDELC6_15HG002complexvarhetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELC6_15HG002complexvarhomalt
0.0000
0.0000
19.6429
91.7708
00229037
41.1111
ciseli-customINDELD16_PLUSHG002complexvar*
48.6337
42.4224
56.9758
58.5526
697946682515432
83.8835
ciseli-customINDELD16_PLUSHG002complexvarhet
53.6535
38.4824
88.5714
55.2511
4266814345634
60.7143
ciseli-customINDELD16_PLUSHG002complexvarhetalt
0.0000
6.0729
0.0000
0.0000
15232000
ciseli-customINDELD16_PLUSHG002complexvarhomalt
50.2549
88.5813
35.0778
60.5689
25633248459398
86.7102
ciseli-customINDELD1_5HG002complexvar*
84.6887
87.0694
82.4348
57.7103
2848342302818260052638
43.9301
ciseli-customINDELD1_5HG002complexvarhet
87.0231
88.2917
85.7906
58.0288
183322431183183034650
21.4239
ciseli-customINDELD1_5HG002complexvarhetalt
0.0000
7.7663
0.0000
0.0000
1051247000
ciseli-customINDELD1_5HG002complexvarhomalt
84.8845
94.7915
76.8524
57.1696
10046552986429711988
66.9135
ciseli-customINDELD6_15HG002complexvar*
60.6154
60.3471
60.8861
55.7398
31992102320220571257
61.1084
ciseli-customINDELD6_15HG002complexvarhet
69.9812
65.9506
74.5366
56.4774
205710622131728196
26.9231
ciseli-customINDELD6_15HG002complexvarhetalt
0.0000
6.5153
0.0000
0.0000
66947000
ciseli-customINDELD6_15HG002complexvarhomalt
60.1083
92.0445
44.6250
54.8278
107693107113291061
79.8345
ciseli-customINDELC1_5HG002complexvar*
31.3007
28.5714
34.6065
88.1221
25299565143
25.3097
ciseli-customINDELC1_5HG002complexvarhet
38.3292
28.5714
58.2090
91.1900
2578564
7.1429
ciseli-customINDELC1_5HG002complexvarhetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELC1_5HG002complexvarhomalt
0.0000
0.0000
30.2740
87.3110
00221509139
27.3084
cchapple-customSNPtvHG002complexvar*
99.7805
99.6506
99.9108
21.2813
245292860244113218153
70.1835
cchapple-customSNPtvHG002complexvarhet
99.7615
99.6630
99.8602
21.5432
150223508149954210146
69.5238
cchapple-customSNPtvHG002complexvarhetalt
0.0000
99.0323
0.0000
0.0000
3073000
cchapple-customSNPtvHG002complexvarhomalt
99.8120
99.6331
99.9915
20.8601
947623499415987
87.5000
ciseli-customINDELC16_PLUSHG002complexvar*
0.0000
0.0000
23.8095
92.5926
00103215
46.8750
ciseli-customINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
28.5714
91.1392
00250
0.0000
ciseli-customINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
22.8571
92.8279
0082715
55.5556
ckim-dragenSNPtiHG002complexvar*
99.9317
99.9245
99.9389
17.8695
508052384508287311156
50.1608
ckim-dragenSNPtiHG002complexvarhet
99.9189
99.9266
99.9111
17.5776
314535231314661280125
44.6429
ckim-dragenSNPtiHG002complexvarhetalt
99.7579
99.5169
100.0000
39.2442
206120900
ckim-dragenSNPtiHG002complexvarhomalt
99.9527
99.9214
99.9840
18.3095
1933111521934173131
100.0000
ckim-gatkINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC1_5HG002complexvar*
0.0000
85.7143
0.0000
0.0000
61000
ckim-gatkINDELC1_5HG002complexvarhet
0.0000
85.7143
0.0000
0.0000
61000
ckim-gatkINDELC1_5HG002complexvarhetalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC1_5HG002complexvarhomalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC6_15HG002complexvar*
0.0000
100.0000
0.0000
0.0000
40000
ckim-gatkINDELC6_15HG002complexvarhet
0.0000
100.0000
0.0000
0.0000
40000