PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
5201-5250 / 86044 show all
cchapple-customINDELD6_15func_cds*
98.8235
97.6744
100.0000
47.5000
4214200
cchapple-customINDELD6_15func_cdshet
98.2456
96.5517
100.0000
43.3962
2813000
cchapple-customINDELD6_15func_cdshetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
55.5556
1201200
cchapple-customINDELI16_PLUSfunc_cds*
95.6522
91.6667
100.0000
75.5556
1111100
cchapple-customINDELI16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
68.9655
90900
cchapple-customINDELI16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
01000
cchapple-customINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
87.5000
20200
cchapple-customINDELD1_5func_cds*
99.6885
100.0000
99.3789
32.9167
159016010
0.0000
cchapple-customINDELD1_5func_cdshet
99.4220
100.0000
98.8506
40.4110
8508610
0.0000
cchapple-customINDELD1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
21.2766
7407400
ciseli-customSNPtvfunc_cds*
95.2555
99.4738
91.3804
30.2616
434823433640911
2.6895
ciseli-customSNPtvfunc_cdshet
92.8964
99.2473
87.3095
32.0576
26372026353832
0.5222
ciseli-customSNPtvfunc_cdshetalt
94.7368
90.0000
100.0000
35.7143
91900
ciseli-customSNPtvfunc_cdshomalt
99.1797
99.8826
98.4866
26.8313
170221692269
34.6154
ckim-dragenINDEL*func_cds*
98.4444
99.5506
97.3626
49.5006
4432443121
8.3333
ckim-dragenINDEL*func_cdshet
97.2603
99.5327
95.0893
57.2519
2131213110
0.0000
ckim-dragenINDEL*func_cdshetalt
88.8889
80.0000
100.0000
63.6364
41400
ckim-dragenINDEL*func_cdshomalt
99.7792
100.0000
99.5595
37.9781
226022611
100.0000
ckim-dragenINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
ckim-dragenINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
ckim-dragenINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
ckim-dragenINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
ciseli-customSNPtifunc_cds*
98.7839
99.4488
98.1278
24.0438
13711761368026131
11.8774
ciseli-customSNPtifunc_cdshet
98.4573
99.2121
97.7138
25.9135
84376784201972
1.0152
ciseli-customSNPtifunc_cdshetalt
93.3333
87.5000
100.0000
41.6667
71700
ciseli-customSNPtifunc_cdshomalt
99.3195
99.8483
98.7963
20.7719
5267852536429
45.3125
ciseli-customINDELI16_PLUSfunc_cds*
0.0000
100.0000
012000
ciseli-customINDELI16_PLUSfunc_cdshet
0.0000
100.0000
09000
ciseli-customINDELI16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
01000
ciseli-customINDELI16_PLUSfunc_cdshomalt
0.0000
100.0000
02000
ciseli-customINDELI6_15func_cds*
53.1250
39.5349
80.9524
32.2581
17261744
100.0000
ciseli-customINDELI6_15func_cdshet
52.9412
37.5000
90.0000
41.1765
915911
100.0000
ciseli-customINDELI6_15func_cdshetalt
0.0000
0.0000
0.0000
04000
ciseli-customINDELI6_15func_cdshomalt
61.5385
53.3333
72.7273
21.4286
87833
100.0000
ciseli-customSNP*func_cds*
97.9137
99.4601
96.4146
25.6110
18052981799066942
6.2780
ciseli-customSNP*func_cdshet
97.0747
99.2205
95.0198
27.5142
1107487110475794
0.6908
ciseli-customSNP*func_cdshetalt
94.7368
90.0000
100.0000
35.7143
91900
ciseli-customSNP*func_cdshomalt
99.2844
99.8567
98.7187
22.2148
69691069349038
42.2222
ciseli-customINDELI1_5func_cds*
86.4865
88.8889
84.2105
28.0303
160201603019
63.3333
ciseli-customINDELI1_5func_cdshet
78.5185
89.8305
69.7368
38.2114
536532313
56.5217
ciseli-customINDELI1_5func_cdshetalt
0.0000
0.0000
0.0000
02000
ciseli-customINDELI1_5func_cdshomalt
91.8455
89.9160
93.8596
19.1489
1071210776
85.7143
ckim-dragenINDELI16_PLUSfunc_cds*
95.6522
91.6667
100.0000
80.0000
1111100
ckim-dragenINDELI16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
73.5294
90900
ckim-dragenINDELI16_PLUSfunc_cdshetalt
0.0000
100.0000
01000
ckim-dragenINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
88.8889
20200
ckim-dragenINDELI1_5func_cds*
98.6301
100.0000
97.2973
39.7394
180018050
0.0000
ckim-dragenINDELI1_5func_cdshet
95.9350
100.0000
92.1875
52.9412
5905950
0.0000