PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
49601-49650 / 86044 show all
eyeh-varpipeINDELI16_PLUSmap_sirenhetalt
22.2222
12.5000
100.0000
75.0000
214200
eyeh-varpipeINDELI16_PLUStech_badpromoters*
57.1429
50.0000
66.6667
40.0000
22211
100.0000
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.3636
10200
eyeh-varpipeINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.1538
10200
eyeh-varpipeINDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
1.1080
0.5587
66.6667
84.2105
1178210
0.0000
eyeh-varpipeINDELI6_15func_cdshetalt
57.1429
50.0000
66.6667
62.5000
22211
100.0000
eyeh-varpipeINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
96.2264
00200
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
96.1538
00200
gduggal-bwavardINDELI16_PLUSmap_l100_m1_e0homalt
57.1429
40.0000
100.0000
90.4762
23200
gduggal-bwavardINDELI16_PLUSmap_l100_m2_e0homalt
57.1429
40.0000
100.0000
92.0000
23200
gduggal-bwavardINDELI16_PLUSmap_l100_m2_e1homalt
57.1429
40.0000
100.0000
92.0000
23200
gduggal-bwavardINDELI16_PLUSmap_l150_m0_e0*
50.0000
50.0000
50.0000
94.8052
22221
50.0000
gduggal-bwavardINDELI16_PLUSmap_l150_m0_e0het
66.6667
100.0000
50.0000
94.3662
20221
50.0000
gduggal-bwavardINDELI16_PLUStech_badpromotershet
80.0000
100.0000
66.6667
78.5714
20211
100.0000
gduggal-bwavardINDELI1_5lowcmp_SimpleRepeat_diTR_51to200*
5.6604
2.9126
100.0000
95.4545
6200200
gduggal-bwavardINDELI1_5lowcmp_SimpleRepeat_diTR_51to200het
36.3636
22.2222
100.0000
95.3488
621200
gduggal-bwavardINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
100.0000
99.8051
00200
gduggal-bwavardINDELI6_15map_l125_m0_e0homalt
50.0000
33.3333
100.0000
90.4762
24200
gduggal-bwavardSNP*decoy*
0.0000
0.0000
100.0000
99.9992
00200
gduggal-bwavardSNP*decoyhomalt
0.0000
0.0000
100.0000
99.9933
00200
gduggal-bwavardSNPtidecoy*
0.0000
0.0000
100.0000
99.9987
00200
gduggal-bwavardSNPtidecoyhomalt
0.0000
0.0000
100.0000
99.9898
00200
gduggal-snapfbINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
57.1429
40.0000
100.0000
99.8589
23200
gduggal-snapfbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
66.6667
50.0000
100.0000
99.8539
22200
gduggal-snapfbINDEL*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
31.5789
18.7500
100.0000
99.9839
313200
gduggal-snapfbINDEL*tech_badpromotershetalt
85.7143
75.0000
100.0000
66.6667
31200
gduggal-bwafbSNPtisegduphetalt
100.0000
100.0000
100.0000
99.1736
20200
gduggal-bwafbSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
20200
gduggal-bwafbSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
gduggal-bwaplatINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
80.0000
66.6667
100.0000
98.7805
21200
gduggal-bwaplatINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
50.0000
40.0000
66.6667
99.7432
23211
100.0000
gduggal-bwaplatINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
80.0000
66.6667
100.0000
98.6395
21200
gduggal-bwaplatINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
66.6667
66.6667
66.6667
98.8848
21211
100.0000
gduggal-bwaplatINDEL*map_l250_m1_e0hetalt
50.0000
33.3333
100.0000
99.4937
24200
gduggal-bwaplatINDEL*map_l250_m2_e0hetalt
50.0000
33.3333
100.0000
99.5680
24200
gduggal-bwaplatINDEL*map_l250_m2_e1hetalt
50.0000
33.3333
100.0000
99.5763
24200
gduggal-bwaplatINDEL*tech_badpromotershetalt
66.6667
50.0000
100.0000
71.4286
22200
gduggal-bwaplatINDELD16_PLUSdecoyhet
66.6667
50.0000
100.0000
99.7531
22200
gduggal-bwaplatINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
97.3684
20200
gduggal-bwaplatINDELD16_PLUSfunc_cdshomalt
66.6667
50.0000
100.0000
66.6667
22200
gduggal-bwaplatINDELD16_PLUSmap_l100_m0_e0hetalt
66.6667
50.0000
100.0000
95.7447
22200
gduggal-bwaplatINDELD16_PLUSmap_l100_m0_e0homalt
57.1429
40.0000
100.0000
96.1538
23200
gduggal-bwaplatINDELD16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
95.0000
21200
gduggal-bwaplatINDELD16_PLUSmap_l125_m1_e0homalt
66.6667
50.0000
100.0000
96.6102
22200
gduggal-bwaplatINDELD16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
95.2381
21200
gduggal-bwaplatINDELD16_PLUSmap_l125_m2_e0homalt
66.6667
50.0000
100.0000
96.9697
22200
gduggal-bwaplatINDELD16_PLUSmap_l125_m2_e1hetalt
66.6667
50.0000
100.0000
95.2381
22200
gduggal-bwaplatINDELD16_PLUSmap_l125_m2_e1homalt
66.6667
50.0000
100.0000
96.9697
22200
gduggal-bwaplatINDELD16_PLUSmap_l250_m1_e0*
66.6667
50.0000
100.0000
99.1632
22200
gduggal-bwaplatINDELD16_PLUStech_badpromoters*
66.6667
50.0000
100.0000
50.0000
22200