PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
49401-49450 / 86044 show all
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
95.3125
30300
rpoplin-dv42SNPtvmap_l150_m0_e0hetalt
75.0000
100.0000
60.0000
94.1176
30322
100.0000
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
86.6667
20200
rpoplin-dv42INDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9601
20200
rpoplin-dv42INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.5893
20200
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.5781
20200
rpoplin-dv42INDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.8304
20200
rpoplin-dv42INDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
rpoplin-dv42INDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
50.0000
20200
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
80.0000
100.0000
66.6667
97.6562
20211
100.0000
rpoplin-dv42INDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
98.0000
20200
rpoplin-dv42INDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
96.3636
20200
rpoplin-dv42INDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.8254
20200
rpoplin-dv42INDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.9231
20200
rpoplin-dv42INDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
80.0000
20200
rpoplin-dv42INDELI16_PLUSmap_l100_m1_e0hetalt
80.0000
66.6667
100.0000
87.5000
21200
rpoplin-dv42INDELI16_PLUSmap_l100_m2_e0hetalt
80.0000
66.6667
100.0000
87.5000
21200
rpoplin-dv42INDELI16_PLUSmap_l100_m2_e1hetalt
80.0000
66.6667
100.0000
87.5000
21200
rpoplin-dv42INDELI16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
84.6154
21200
rpoplin-dv42INDELI16_PLUSmap_l125_m1_e0homalt
80.0000
66.6667
100.0000
88.2353
21200
rpoplin-dv42INDELI16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
84.6154
21200
rpoplin-dv42INDELI16_PLUSmap_l125_m2_e0homalt
80.0000
66.6667
100.0000
90.4762
21200
rpoplin-dv42INDELI16_PLUSmap_l125_m2_e1hetalt
80.0000
66.6667
100.0000
84.6154
21200
rpoplin-dv42INDELI16_PLUSmap_l125_m2_e1homalt
80.0000
66.6667
100.0000
90.9091
21200
rpoplin-dv42INDELI16_PLUSmap_l150_m0_e0het
80.0000
100.0000
66.6667
76.9231
20210
0.0000
rpoplin-dv42INDELI16_PLUSmap_l150_m1_e0homalt
80.0000
66.6667
100.0000
84.6154
21200
rpoplin-dv42INDELI16_PLUSmap_l150_m2_e0homalt
80.0000
66.6667
100.0000
88.8889
21200
rpoplin-dv42INDELI16_PLUSmap_l150_m2_e1homalt
80.0000
66.6667
100.0000
88.8889
21200
rpoplin-dv42INDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
66.6667
20200
rpoplin-dv42INDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
60.0000
20200
rpoplin-dv42INDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
66.6667
20200
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
80.0000
100.0000
66.6667
86.9565
20210
0.0000
rpoplin-dv42INDELI1_5map_l250_m1_e0hetalt
80.0000
100.0000
66.6667
98.1481
20210
0.0000
rpoplin-dv42INDELI1_5map_l250_m2_e0hetalt
80.0000
100.0000
66.6667
98.5366
20210
0.0000
rpoplin-dv42INDELI1_5map_l250_m2_e1hetalt
80.0000
100.0000
66.6667
98.5714
20210
0.0000
rpoplin-dv42INDELI6_15map_l150_m0_e0het
50.0000
50.0000
50.0000
95.8763
22222
100.0000
rpoplin-dv42INDELI6_15map_l150_m0_e0homalt
66.6667
50.0000
100.0000
96.8254
22200
rpoplin-dv42INDELI6_15map_l250_m1_e0het
50.0000
50.0000
50.0000
96.3303
22222
100.0000
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
86.6667
20200
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
86.6667
20200
rpoplin-dv42SNP*lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
96.8254
20200
rpoplin-dv42SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
95.4545
20200
rpoplin-dv42SNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
77.7778
20200
rpoplin-dv42SNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
95.5556
20200
rpoplin-dv42SNPtisegduphetalt
100.0000
100.0000
100.0000
99.2857
20200
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
86.6667
20200
raldana-dualsentieonINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
98.6486
20200
raldana-dualsentieonINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
97.0588
20200
raldana-dualsentieonINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9456
20200
raldana-dualsentieonINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.2674
20200