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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 85 86 87 88 89 90 91 92 93 ... 1720 1721 » 4401-4450 / 86044 show all
gduggal-bwavard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	59.9738	55.8902	64.7011	63.2619	17554	13854	17358	9470	8822	93.1573
gduggal-bwavard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	59.9738	55.8902	64.7011	63.2619	17554	13854	17358	9470	8822	93.1573
gduggal-snapfb	SNP	ti	HG002compoundhet	*	85.8670	98.1291	76.3290	43.9481	17151	327	17345	5379	340	6.3209
hfeng-pmm2	SNP	*	map_l125_m2_e0	homalt	99.8130	99.8158	99.8101	69.0538	17343	32	17343	33	14	42.4242
jpowers-varprowl	INDEL	I1_5	HG002complexvar	het	94.3417	95.4478	93.2609	57.7585	17361	828	17340	1253	1221	97.4461
hfeng-pmm1	SNP	*	map_l125_m2_e0	homalt	99.8100	99.7928	99.8273	69.0265	17339	36	17339	30	12	40.0000
hfeng-pmm3	SNP	*	map_l125_m2_e0	homalt	99.7985	99.7755	99.8215	68.9465	17336	39	17336	31	13	41.9355
cchapple-custom	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.6346	99.4826	99.7870	59.5165	16344	85	17330	37	22	59.4595
egarrison-hhga	SNP	*	map_l125_m2_e0	homalt	99.8127	99.7007	99.9250	68.9614	17323	52	17323	13	13	100.0000
gduggal-bwavard	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	96.8048	97.6528	95.9714	65.8504	17432	419	17319	727	195	26.8226
ltrigg-rtg1	SNP	*	map_l125_m2_e0	homalt	99.7839	99.6604	99.9077	68.1589	17316	59	17317	16	16	100.0000
jpowers-varprowl	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	97.9095	98.1671	97.6533	71.1033	17246	322	17311	416	17	4.0865
raldana-dualsentieon	SNP	*	map_l125_m2_e0	homalt	99.7723	99.6317	99.9134	65.2834	17311	64	17311	15	11	73.3333
gduggal-bwavard	INDEL	I1_5	HG002complexvar	het	93.6787	97.5535	90.0999	57.7758	17744	445	17310	1902	1663	87.4343
ckim-gatk	SNP	ti	HG002compoundhet	*	99.4312	99.0159	99.8500	36.2044	17306	172	17306	26	21	80.7692
hfeng-pmm3	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.2263	98.5599	99.9019	64.0348	17315	253	17306	17	4	23.5294
ltrigg-rtg2	INDEL	I1_5	HG002complexvar	het	99.3853	99.2028	99.5685	52.2881	18044	145	17305	75	44	58.6667
qzeng-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	92.6354	91.1441	94.1762	35.9848	16642	1617	17303	1070	870	81.3084
ltrigg-rtg2	SNP	*	map_l125_m2_e0	homalt	99.7578	99.5741	99.9422	65.9494	17301	74	17302	10	9	90.0000
jli-custom	SNP	*	map_l125_m2_e0	homalt	99.7463	99.5741	99.9191	65.3928	17301	74	17301	14	13	92.8571
astatham-gatk	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.2005	98.5314	99.8788	66.3539	17310	258	17301	21	11	52.3810
bgallagher-sentieon	SNP	*	map_l125_m2_e0	homalt	99.7291	99.5741	99.8845	66.0253	17301	74	17301	20	15	75.0000
ndellapenna-hhga	SNP	*	map_l125_m2_e0	homalt	99.7405	99.5626	99.9191	67.9668	17299	76	17299	14	13	92.8571
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	98.9932	98.5200	99.4710	64.4487	17308	260	17299	92	10	10.8696
hfeng-pmm1	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.1947	98.5087	99.8903	63.5767	17306	262	17297	19	5	26.3158
astatham-gatk	SNP	ti	map_l150_m2_e0	*	91.3750	84.3165	99.7232	79.9461	17295	3217	17291	48	27	56.2500
jmaeng-gatk	SNP	ti	HG002compoundhet	*	99.3792	98.9129	99.8498	36.3432	17288	190	17288	26	22	84.6154
jpowers-varprowl	SNP	*	map_l125_m2_e1	homalt	99.1340	98.5911	99.6828	71.9295	17285	247	17285	55	40	72.7273
jlack-gatk	SNP	*	map_l125_m2_e1	homalt	99.2279	98.5911	99.8729	66.9215	17285	247	17285	22	16	72.7273
ckim-dragen	SNP	*	segdup	het	97.6498	99.7863	95.6029	93.5624	17280	37	17285	795	5	0.6289
jli-custom	SNP	*	segdup	het	99.4076	99.8037	99.0146	89.8653	17283	34	17283	172	2	1.1628
mlin-fermikit	INDEL	I1_5	HG002complexvar	het	96.6423	95.7777	97.5227	51.7717	17421	768	17282	439	429	97.7221
bgallagher-sentieon	SNP	*	segdup	het	99.2648	99.8268	98.7091	91.1291	17287	30	17281	226	2	0.8850
ghariani-varprowl	SNP	*	map_l125_m2_e1	homalt	99.1110	98.5626	99.6655	70.0625	17280	252	17280	58	39	67.2414
dgrover-gatk	SNP	*	segdup	het	99.5334	99.8152	99.2533	91.5277	17285	32	17279	130	3	2.3077
cchapple-custom	SNP	*	segdup	het	99.4246	99.7863	99.0654	93.2744	17280	37	17278	163	5	3.0675
rpoplin-dv42	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	95.5056	97.7103	93.3982	67.8398	17411	408	17274	1221	1162	95.1679
jlack-gatk	SNP	*	segdup	het	97.2497	99.7806	94.8441	94.7945	17279	38	17273	939	5	0.5325
hfeng-pmm2	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.0538	98.3322	99.7862	63.3791	17275	293	17266	37	4	10.8108
hfeng-pmm2	SNP	*	segdup	het	99.5302	99.7344	99.3269	90.9417	17271	46	17265	117	0	0.0000
hfeng-pmm3	SNP	*	segdup	het	99.5790	99.7344	99.4241	89.8527	17271	46	17265	100	0	0.0000
raldana-dualsentieon	SNP	*	segdup	het	99.4013	99.7344	99.0704	90.7424	17271	46	17265	162	1	0.6173
gduggal-snapvard	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	88.6909	97.1990	81.5523	71.2536	17351	500	17263	3905	147	3.7644
mlin-fermikit	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	98.0436	96.7173	99.4069	53.0396	17265	586	17262	103	9	8.7379
ckim-dragen	SNP	*	map_l125_m2_e0	homalt	99.5644	99.3151	99.8150	63.8939	17256	119	17261	32	29	90.6250
anovak-vg	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	*	97.9194	98.3001	97.5417	56.1712	16885	292	17260	435	173	39.7701
hfeng-pmm1	SNP	*	segdup	het	99.6248	99.6939	99.5558	89.5848	17264	53	17258	77	0	0.0000
dgrover-gatk	SNP	*	map_l125_m2_e0	homalt	99.6075	99.3209	99.8958	66.5083	17257	118	17257	18	13	72.2222
ltrigg-rtg1	INDEL	I1_5	HG002complexvar	het	99.2372	98.7905	99.6881	51.9353	17969	220	17257	54	28	51.8519
gduggal-bwavard	SNP	ti	map_l100_m1_e0	homalt	98.5262	97.1882	99.9016	59.9578	17455	505	17256	17	13	76.4706

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