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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 743 744 745 746 747 748 749 750 751 ... 1720 1721 » 37301-37350 / 86044 show all
gduggal-bwavard	INDEL	D1_5	map_l250_m0_e0	het	69.4737	100.0000	53.2258	97.1702	33	0	33	29	2	6.8966
gduggal-bwafb	INDEL	D16_PLUS	map_l100_m1_e0	het	74.7073	63.0435	91.6667	81.4433	29	17	33	3	3	100.0000
gduggal-bwafb	INDEL	D16_PLUS	map_l100_m2_e0	het	72.8311	60.4167	91.6667	82.9384	29	19	33	3	3	100.0000
gduggal-bwafb	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	het	91.6667	84.6154	100.0000	65.6250	11	2	33	0	0
gduggal-bwafb	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt	90.3657	84.5361	97.0588	20.9302	82	15	33	1	1	100.0000
gduggal-bwafb	INDEL	D6_15	map_l125_m0_e0	het	93.2102	89.6552	97.0588	89.8204	26	3	33	1	0	0.0000
gduggal-bwafb	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	80.1822	76.1905	84.6154	73.4694	64	20	33	6	5	83.3333
gduggal-bwavard	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	*	82.7434	80.9524	84.6154	92.0408	34	8	33	6	3	50.0000
gduggal-snapfb	INDEL	*	map_l100_m2_e0	hetalt	60.8114	49.6000	78.5714	93.3439	62	63	33	9	5	55.5556
eyeh-varpipe	INDEL	C1_5	map_l100_m1_e0	het	0.0000	0.0000	86.8421	95.1157	0	0	33	5	2	40.0000
eyeh-varpipe	INDEL	C1_5	map_l100_m2_e0	het	0.0000	0.0000	86.8421	95.5083	0	0	33	5	2	40.0000
eyeh-varpipe	INDEL	D16_PLUS	map_l100_m1_e0	het	75.4825	69.5652	82.5000	81.5668	32	14	33	7	7	100.0000
eyeh-varpipe	INDEL	D16_PLUS	map_l100_m2_e0	het	73.7430	66.6667	82.5000	83.6735	32	16	33	7	7	100.0000
eyeh-varpipe	INDEL	D1_5	segdup	hetalt	60.7686	44.2308	97.0588	96.6403	23	29	33	1	1	100.0000
gduggal-bwafb	SNP	tv	tech_badpromoters	het	94.2857	100.0000	89.1892	66.6667	33	0	33	4	0	0.0000
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	homalt	84.6154	73.3333	100.0000	54.7945	33	12	33	0	0
eyeh-varpipe	SNP	ti	func_cds	hetalt	100.0000	100.0000	100.0000	57.6923	8	0	33	0	0
eyeh-varpipe	SNP	tv	tech_badpromoters	het	63.4615	100.0000	46.4789	76.6447	33	0	33	38	0	0.0000
gduggal-bwafb	INDEL	*	tech_badpromoters	homalt	98.5075	100.0000	97.0588	53.4247	33	0	33	1	1	100.0000
cchapple-custom	INDEL	*	tech_badpromoters	homalt	100.0000	100.0000	100.0000	57.1429	33	0	33	0	0
cchapple-custom	INDEL	C16_PLUS	*	het	0.0000	0.0000	84.6154	96.1155	0	0	33	6	5	83.3333
cchapple-custom	INDEL	C16_PLUS	HG002complexvar	het	0.0000	0.0000	84.6154	90.1515	0	0	33	6	5	83.3333
cchapple-custom	INDEL	D6_15	map_l125_m2_e0	homalt	94.2857	91.6667	97.0588	85.4701	33	3	33	1	1	100.0000
ckim-isaac	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	het	69.2913	80.0000	61.1111	70.0000	40	10	33	21	16	76.1905
ckim-isaac	INDEL	*	map_l250_m0_e0	het	75.8621	62.2642	97.0588	98.4760	33	20	33	1	1	100.0000
ckim-isaac	INDEL	*	tech_badpromoters	het	94.5946	89.7436	100.0000	48.4375	35	4	33	0	0
ciseli-custom	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt	0.0000	0.0000	16.7513	92.3465	0	0	33	164	45	27.4390
ciseli-custom	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	38.8235	55.9322	29.7297	69.0808	33	26	33	78	73	93.5897
cchapple-custom	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	*	84.6154	78.5714	91.6667	96.0656	33	9	33	3	0	0.0000
ciseli-custom	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	42.0382	33.3333	56.8966	98.7039	1	2	33	25	3	12.0000
ckim-gatk	INDEL	*	tech_badpromoters	homalt	100.0000	100.0000	100.0000	57.1429	33	0	33	0	0
ckim-gatk	INDEL	D16_PLUS	map_siren	homalt	95.6522	97.0588	94.2857	94.7368	33	1	33	2	0	0.0000
ckim-gatk	INDEL	D1_5	map_l250_m0_e0	het	82.5000	100.0000	70.2128	98.1583	33	0	33	14	0	0.0000
ckim-gatk	INDEL	D6_15	map_l125_m1_e0	homalt	98.5075	97.0588	100.0000	89.5899	33	1	33	0	0
ciseli-custom	SNP	*	lowcmp_SimpleRepeat_quadTR_51to200	homalt	49.5193	78.0488	36.2637	92.4606	32	9	33	58	18	31.0345
ckim-dragen	INDEL	*	tech_badpromoters	homalt	100.0000	100.0000	100.0000	59.2593	33	0	33	0	0
ckim-dragen	INDEL	D16_PLUS	map_siren	homalt	89.1892	97.0588	82.5000	94.7368	33	1	33	7	2	28.5714
ckim-dragen	INDEL	D1_5	map_l250_m0_e0	het	92.9577	100.0000	86.8421	97.4132	33	0	33	5	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m1_e0	homalt	98.5075	100.0000	97.0588	87.7256	33	0	33	1	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m2_e0	homalt	98.5075	100.0000	97.0588	88.9610	33	0	33	1	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m2_e1	homalt	98.5075	100.0000	97.0588	89.2063	33	0	33	1	0	0.0000
ltrigg-rtg1	SNP	tv	tech_badpromoters	het	92.9577	100.0000	86.8421	59.1398	33	0	33	5	0	0.0000
jmaeng-gatk	INDEL	D16_PLUS	map_siren	homalt	92.9577	97.0588	89.1892	94.0419	33	1	33	4	0	0.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	91.6667	84.6154	100.0000	59.7561	33	6	33	0	0
jmaeng-gatk	INDEL	D6_15	map_l125_m1_e0	homalt	98.5075	97.0588	100.0000	89.4569	33	1	33	0	0
jmaeng-gatk	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	homalt	97.0588	94.2857	100.0000	92.3256	33	2	33	0	0
ltrigg-rtg1	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	0.0000	0.0000	100.0000	95.1895	0	0	33	0	0
ltrigg-rtg1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	97.0142	96.9697	97.0588	74.4361	32	1	33	1	1	100.0000
ltrigg-rtg1	INDEL	D6_15	map_l125_m2_e0	homalt	98.5915	97.2222	100.0000	85.4626	35	1	33	0	0
ltrigg-rtg1	INDEL	I16_PLUS	HG002compoundhet	het	74.1304	65.9574	84.6154	79.8969	31	16	33	6	5	83.3333

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