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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 649 650 651 652 653 654 655 656 657 ... 1720 1721 » 32601-32650 / 86044 show all
hfeng-pmm3	INDEL	D6_15	map_l150_m2_e1	*	98.8095	97.6471	100.0000	90.8891	83	2	83	0	0
hfeng-pmm3	INDEL	I16_PLUS	map_siren	*	95.3756	95.3488	95.4023	91.3087	82	4	83	4	1	25.0000
hfeng-pmm3	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	98.2036	96.4706	100.0000	57.8680	82	3	83	0	0
hfeng-pmm2	INDEL	D16_PLUS	map_l100_m2_e0	*	88.2979	92.2222	84.6939	93.9840	83	7	83	15	3	20.0000
hfeng-pmm2	INDEL	D6_15	map_l150_m2_e1	*	98.8095	97.6471	100.0000	92.0115	83	2	83	0	0
hfeng-pmm2	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	94.4785	89.5349	100.0000	78.2152	77	9	83	0	0
hfeng-pmm2	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	98.2036	96.4706	100.0000	57.8680	82	3	83	0	0
jlack-gatk	INDEL	I16_PLUS	map_siren	*	94.2920	95.3488	93.2584	92.8743	82	4	83	6	1	16.6667
gduggal-bwavard	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*	55.6802	53.5032	58.0420	68.9130	84	73	83	60	52	86.6667
eyeh-varpipe	INDEL	D16_PLUS	map_siren	*	64.7096	56.6434	75.4545	82.7316	81	62	83	27	22	81.4815
eyeh-varpipe	INDEL	I6_15	map_l100_m2_e0	het	79.0220	72.1311	87.3684	76.1905	44	17	83	12	10	83.3333
eyeh-varpipe	INDEL	I6_15	map_l100_m2_e1	het	79.0220	72.1311	87.3684	76.4851	44	17	83	12	10	83.3333
jmaeng-gatk	INDEL	D16_PLUS	map_l100_m2_e0	*	89.2473	92.2222	86.4583	95.4717	83	7	83	13	4	30.7692
jmaeng-gatk	INDEL	D1_5	map_l150_m0_e0	homalt	98.2249	97.6471	98.8095	90.4328	83	2	83	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	map_l150_m2_e1	*	97.6471	97.6471	97.6471	94.2490	83	2	83	2	0	0.0000
jpowers-varprowl	SNP	ti	tech_badpromoters	*	96.5116	97.6471	95.4023	51.1236	83	2	83	4	1	25.0000
ltrigg-rtg1	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.4220	98.8506	100.0000	71.4777	86	1	83	0	0
ltrigg-rtg1	INDEL	D6_15	segdup	het	97.1910	96.7391	97.6471	92.1803	89	3	83	2	0	0.0000
jmaeng-gatk	SNP	ti	tech_badpromoters	*	98.2249	97.6471	98.8095	45.4545	83	2	83	1	1	100.0000
ltrigg-rtg1	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	96.3415	92.9412	100.0000	63.4361	79	6	83	0	0
jli-custom	INDEL	D6_15	map_l150_m2_e1	*	98.8095	97.6471	100.0000	91.1230	83	2	83	0	0
bgallagher-sentieon	INDEL	D16_PLUS	map_l100_m2_e0	*	87.3684	92.2222	83.0000	94.8823	83	7	83	17	4	23.5294
bgallagher-sentieon	INDEL	D6_15	map_l150_m2_e1	*	97.6471	97.6471	97.6471	92.7101	83	2	83	2	0	0.0000
bgallagher-sentieon	SNP	ti	tech_badpromoters	*	98.2249	97.6471	98.8095	45.0980	83	2	83	1	1	100.0000
anovak-vg	INDEL	I16_PLUS	HG002compoundhet	het	0.0000	0.0000	45.8564	44.3077	0	47	83	98	29	29.5918
astatham-gatk	INDEL	D6_15	map_l150_m2_e1	*	97.6471	97.6471	97.6471	92.8149	83	2	83	2	0	0.0000
astatham-gatk	INDEL	I16_PLUS	map_siren	*	94.2920	95.3488	93.2584	92.7642	82	4	83	6	1	16.6667
astatham-gatk	SNP	ti	tech_badpromoters	*	98.2249	97.6471	98.8095	45.0980	83	2	83	1	1	100.0000
rpoplin-dv42	INDEL	D6_15	map_l150_m2_e1	*	98.2249	97.6471	98.8095	91.9617	83	2	83	1	1	100.0000
raldana-dualsentieon	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	*	90.2174	82.1782	100.0000	93.4543	83	18	83	0	0
raldana-dualsentieon	SNP	ti	tech_badpromoters	*	98.2249	97.6471	98.8095	42.8571	83	2	83	1	1	100.0000
raldana-dualsentieon	INDEL	I16_PLUS	map_siren	*	95.9267	95.3488	96.5116	89.3696	82	4	83	3	1	33.3333
dgrover-gatk	INDEL	D1_5	map_l150_m0_e0	homalt	98.2249	97.6471	98.8095	90.8795	83	2	83	1	1	100.0000
ckim-isaac	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	het	65.9384	80.0000	56.0811	49.8305	108	27	83	65	61	93.8462
ckim-isaac	INDEL	D1_5	map_l250_m1_e0	*	64.8438	48.5380	97.6471	96.7779	83	88	83	2	2	100.0000
egarrison-hhga	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	95.4023	93.2584	97.6471	70.5882	83	6	83	2	1	50.0000
ckim-vqsr	INDEL	D16_PLUS	map_l100_m2_e0	*	90.2174	92.2222	88.2979	95.8952	83	7	83	11	4	36.3636
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	93.1677	87.2093	100.0000	76.4205	75	11	83	0	0
ckim-vqsr	INDEL	D6_15	map_l150_m2_e1	*	96.4706	96.4706	96.4706	94.3296	82	3	82	3	0	0.0000
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	97.5904	95.2941	100.0000	52.8736	81	4	82	0	0
dgrover-gatk	INDEL	D16_PLUS	map_l100_m2_e0	*	86.7725	91.1111	82.8283	95.1111	82	8	82	17	4	23.5294
egarrison-hhga	INDEL	I6_15	segdup	het	99.3939	98.7952	100.0000	92.1830	82	1	82	0	0
eyeh-varpipe	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	*	34.6434	31.9820	37.7880	55.5328	71	151	82	135	123	91.1111
egarrison-hhga	INDEL	D1_5	map_l150_m0_e0	homalt	97.6190	96.4706	98.7952	90.8691	82	3	82	1	1	100.0000
dgrover-gatk	INDEL	D6_15	map_l150_m2_e1	*	97.6190	96.4706	98.7952	93.1120	82	3	82	1	0	0.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	96.1564	94.7368	97.6190	90.9968	90	5	82	2	0	0.0000
dgrover-gatk	INDEL	I6_15	segdup	het	99.3939	98.7952	100.0000	93.9394	82	1	82	0	0
eyeh-varpipe	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	79.6906	72.0588	89.1304	56.8075	49	19	82	10	10	100.0000
eyeh-varpipe	INDEL	I6_15	map_l100_m1_e0	het	79.4144	72.8814	87.2340	74.7312	43	16	82	12	10	83.3333
gduggal-bwavard	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	het	0.0000	0.0000	56.5517	95.0274	0	0	82	63	11	17.4603

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