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Explore HG002 comparison results
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EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
251-300 / 86044 show all
hfeng-pmm1SNP*HG002complexvar*
99.8780
99.7704
99.9859
18.8078
752649173275250410651
48.1132
hfeng-pmm2SNP*HG002complexvar*
99.8743
99.7689
99.9799
18.8346
752638174375249515159
39.0728
gduggal-snapfbSNP*HG002complexvar*
99.1200
99.6105
98.6343
21.7486
7514472938752277104161326
12.7304
egarrison-hhgaSNP*HG002complexvar*
99.8252
99.7002
99.9506
18.9844
7521192262752170372223
59.9462
ndellapenna-hhgaSNP*HG002complexvar*
99.7910
99.6474
99.9350
18.9550
7517212660751769489351
71.7791
cchapple-customSNP*HG002complexvar*
99.8003
99.6796
99.9214
18.6735
7519642417749599590426
72.2034
jpowers-varprowlSNP*HG002complexvar*
99.4683
99.2937
99.6435
20.7160
749051532874940426811602
59.7538
ckim-gatkSNP*HG002complexvar*
99.5695
99.1746
99.9675
19.4723
7481546227748002243101
41.5638
jmaeng-gatkSNP*HG002complexvar*
99.5566
99.1508
99.9656
19.5091
7479756406747823257106
41.2451
astatham-gatkSNP*HG002complexvar*
99.1835
98.3938
99.9860
19.2643
7422641211774211210462
59.6154
ckim-vqsrSNP*HG002complexvar*
98.7826
97.6098
99.9840
19.7255
7363501803173620111858
49.1525
gduggal-snapplatSNP*HG002complexvar*
97.9967
97.4708
98.5284
22.9400
73530519080736073109941866
16.9729
mlin-fermikitSNP*HG002complexvar*
98.2239
97.1863
99.2840
18.6883
7331592122673307452875014
94.8364
gduggal-bwaplatSNP*HG002complexvar*
97.7797
96.6309
98.9561
21.4247
7289652541672951676961060
13.7734
asubramanian-gatkSNP*HG002complexvar*
98.2310
96.5837
99.9354
19.5730
7286092577272846647154
11.4650
qzeng-customSNP*HG002complexvar*
99.1204
98.4430
99.8072
19.9398
742639117467238431398631
45.1359
ciseli-customSNP*HG002complexvar*
95.9712
96.9985
94.9655
20.7202
73174222643718679381008358
21.9370
anovak-vgSNP*HG002complexvar*
97.6964
96.9184
98.4870
19.4533
73113823247712315109438438
77.1087
gduggal-bwavardSNP*HG002complexvar*
98.3118
97.1354
99.5171
19.6107
7327752161071218234562272
65.7407
gduggal-snapvardSNP*HG002complexvar*
97.8941
96.7741
99.0404
21.0357
7300482433670836268632537
36.9663
eyeh-varpipeSNP*HG002complexvar*
99.8557
99.8989
99.8126
18.3366
7536227636998061314293
22.2983
ckim-isaacSNP*HG002complexvar*
95.9550
92.3552
99.8467
16.9098
696714576716970671070847
79.1589
cchapple-customSNPtv*het
99.6701
99.8702
99.4708
26.9512
5909287685915533147233
7.4039
ckim-dragenSNPtv*het
99.7113
99.9417
99.4820
27.9772
5913513455915443080126
4.0909
bgallagher-sentieonSNPtv*het
99.8318
99.9594
99.7045
23.0898
591456240591385175353
3.0234
dgrover-gatkSNPtv*het
99.8830
99.9556
99.8105
23.6829
591433263591362112357
5.0757
jli-customSNPtv*het
99.8561
99.9410
99.7714
21.8920
591347349591292135558
4.2804
jlack-gatkSNPtv*het
99.3606
99.9332
98.7945
31.3268
5913013955912307214153
2.1209
rpoplin-dv42SNPtv*het
99.9398
99.9275
99.9522
22.4174
591267429591187283104
36.7491
ltrigg-rtg1SNPtv*het
99.7418
99.8465
99.6372
20.0234
590796908591027215250
2.3234
ltrigg-rtg2SNPtv*het
99.7405
99.8410
99.6402
19.4900
590763941590991213460
2.8116
gduggal-bwafbSNPtv*het
99.6077
99.8543
99.3624
27.5297
5908428625909313792213
5.6171
ghariani-varprowlSNPtv*het
98.5275
99.8276
97.2608
33.9264
590670102059087716641154
0.9254
hfeng-pmm3SNPtv*het
99.9161
99.8738
99.9586
21.3235
59094974759087524512
4.8980
gduggal-snapfbSNPtv*het
98.4503
99.7960
97.1404
29.1063
590497120759083917393571
3.2829
hfeng-pmm2SNPtv*het
99.8886
99.8560
99.9212
22.0414
59084485259077046618
3.8627
hfeng-pmm1SNPtv*het
99.9077
99.8553
99.9601
20.8554
59084085659076623619
8.0509
raldana-dualsentieonSNPtv*het
99.8532
99.8447
99.8617
22.1748
59077791959070381822
2.6895
egarrison-hhgaSNPtv*het
99.8548
99.7659
99.9438
20.8578
590311138559033233244
13.2530
ndellapenna-hhgaSNPtv*het
99.8309
99.7335
99.9285
20.7977
590119157759013842245
10.6635
ckim-gatkSNPtv*het
99.5973
99.6088
99.5858
30.9441
5893812315589308245161
2.4888
jmaeng-gatkSNPtv*het
99.5410
99.5807
99.5013
31.3482
5892152481589142295352
1.7609
jpowers-varprowlSNPtv*het
99.1037
99.3176
98.8908
29.6901
58765740385878246593166
2.5178
qzeng-customSNPtv*het
99.3391
99.1721
99.5067
29.7409
58680548995855782903302
10.4030
ckim-vqsrSNPtv*het
99.3645
98.9162
99.8170
31.1430
5852836413585211107339
3.6347
gduggal-bwavardSNPtv*het
99.1377
99.1291
99.1462
30.0519
586551515358408950301454
28.9066
eyeh-varpipeSNPtv*het
98.0748
99.9564
96.2628
25.2886
59144625858337122648112
0.4945
gduggal-snapvardSNPtv*het
98.6977
99.0250
98.3726
31.6253
585935576958336696511423
14.7446
astatham-gatkSNPtv*het
99.2722
98.5893
99.9647
23.3815
583349834758328220635
16.9903
gduggal-snapplatSNPtv*het
98.3145
98.0664
98.5638
36.3598
580263114415806588461866
10.2352