PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
1001-1050 / 86044 show all
hfeng-pmm3SNP*map_l100_m2_e1*
99.6666
99.5946
99.7387
65.1913
744343037442319531
15.8974
bgallagher-sentieonSNP*map_l100_m2_e1*
99.4314
99.5705
99.2927
67.0857
744163217440553081
15.2830
hfeng-pmm2SNP*map_l100_m2_e1*
99.5245
99.5678
99.4812
67.6245
744143237440338847
12.1134
ndellapenna-hhgaINDEL*HG002complexvar*
97.2866
96.6882
97.8924
67.2163
7439025487436316011150
71.8301
dgrover-gatkSNP*map_l100_m2_e1*
99.4995
99.4835
99.5154
68.3658
743513867434036279
21.8232
gduggal-bwafbINDEL*HG002complexvar*
96.4189
94.4813
98.4377
54.9407
7269242467428911791015
86.0899
raldana-dualsentieonSNP*map_l100_m2_e1*
99.3646
99.4032
99.3261
65.5411
742914467428050423
4.5635
hfeng-pmm1SNP*map_l100_m2_e1*
99.5878
99.3979
99.7783
64.6489
742874507427616549
29.6970
jli-customSNP*map_l100_m2_e1*
99.4761
99.3323
99.6202
63.1271
742384997423528379
27.9152
ckim-dragenSNP*map_l100_m2_e1*
98.6686
99.2949
98.0501
69.8284
74210527742211476153
10.3659
rpoplin-dv42SNP*map_l100_m2_e1*
99.4091
99.2775
99.5411
65.1919
7419754074186342199
58.1871
egarrison-hhgaSNP*map_l100_m2_e1*
99.5464
99.2547
99.8398
64.7282
741805577418111950
42.0168
gduggal-bwafbSNP*map_l100_m2_e1*
99.0356
99.1356
98.9358
69.1822
7409164674093797164
20.5772
jlack-gatkSNP*map_l100_m2_e1*
97.0682
99.1343
95.0864
75.5739
74090647740793828292
7.6280
astatham-gatkSNP*map_sirenhet
89.6918
81.4059
99.8557
63.3177
74072169197405810741
38.3178
ghariani-varprowlSNP*map_l100_m2_e1*
98.3564
99.0460
97.6764
72.0101
74024713740271761324
18.3986
ndellapenna-hhgaSNP*map_l100_m2_e1*
99.3413
98.8761
99.8109
63.7314
738978407389914063
45.0000
ltrigg-rtg1SNP*map_l100_m2_e1*
99.3071
98.8520
99.7664
59.3097
738798587387617338
21.9653
ltrigg-rtg2SNP*map_l100_m2_e1*
99.2263
98.6673
99.7916
56.2116
737419967373815424
15.5844
hfeng-pmm3SNP*map_l100_m2_e0*
99.6651
99.5917
99.7386
65.1842
736623027365119331
16.0622
bgallagher-sentieonSNP*map_l100_m2_e0*
99.4275
99.5674
99.2880
67.0766
736443207363352881
15.3409
hfeng-pmm2SNP*map_l100_m2_e0*
99.5209
99.5633
99.4785
67.6209
736413237363038647
12.1762
dgrover-gatkSNP*map_l100_m2_e0*
99.4963
99.4795
99.5130
68.3628
735793857356836079
21.9444
raldana-dualsentieonSNP*map_l100_m2_e0*
99.3627
99.3970
99.3284
65.5143
735184467350749723
4.6278
hfeng-pmm1SNP*map_l100_m2_e0*
99.5855
99.3929
99.7787
64.6417
735154497350416349
30.0613
jli-customSNP*map_l100_m2_e0*
99.4726
99.3267
99.6190
63.1033
734664987346328179
28.1139
ckim-dragenSNP*map_l100_m2_e0*
98.6634
99.2943
98.0406
69.7855
73442522734531468152
10.3542
rpoplin-dv42SNP*map_l100_m2_e0*
99.4070
99.2740
99.5404
65.1757
7342753773416339198
58.4071
egarrison-hhgaSNP*map_l100_m2_e0*
99.5430
99.2483
99.8395
64.7214
734085567340911850
42.3729
gduggal-bwafbSNP*map_l100_m2_e0*
99.0302
99.1280
98.9327
69.1496
7331964573321791163
20.6068
jlack-gatkSNP*map_l100_m2_e0*
97.0473
99.1293
95.0510
75.5620
73320644733093817291
7.6238
ghariani-varprowlSNP*map_l100_m2_e0*
98.3520
99.0401
97.6734
71.9819
73254710732571745322
18.4527
ndellapenna-hhgaSNP*map_l100_m2_e0*
99.3385
98.8697
99.8117
63.7221
731288367313013863
45.6522
gduggal-snapfbSNP*map_l100_m2_e1*
97.7287
97.8404
97.6173
69.6430
731231614731291785689
38.5994
gduggal-snapvardINDEL*HG002complexvar*
84.5803
84.0929
85.0735
55.5785
646961223873113128288678
67.6489
ltrigg-rtg1SNP*map_l100_m2_e0*
99.3059
98.8413
99.7748
59.2762
731078577310416538
23.0303
jpowers-varprowlSNP*map_l100_m2_e1*
98.0534
97.7615
98.3471
71.6291
730641673730661228334
27.1987
cchapple-customSNP*map_l100_m2_e1*
97.5551
97.7575
97.3536
69.9828
730611676730601986410
20.6445
ltrigg-rtg2SNP*map_l100_m2_e0*
99.2235
98.6534
99.8003
56.1674
729689967296514624
16.4384
gduggal-snapfbSNP*map_l100_m2_e0*
97.7110
97.8206
97.6017
69.6113
723521612723581778689
38.7514
mlin-fermikitINDEL*HG002complexvar*
95.4305
94.5346
96.3436
54.3245
7273342057235627462618
95.3387
jpowers-varprowlSNP*map_l100_m2_e0*
98.0473
97.7530
98.3434
71.6108
723021662723041218332
27.2578
cchapple-customSNP*map_l100_m2_e0*
97.5457
97.7435
97.3487
69.9609
722951669722971969408
20.7212
eyeh-varpipeSNP*map_l100_m2_e1*
98.6948
99.7404
97.6710
69.5344
7454319472256172351
2.9600
hfeng-pmm3SNP*map_l100_m1_e0*
99.6620
99.5870
99.7371
63.4436
721042997209319031
16.3158
bgallagher-sentieonSNP*map_l100_m1_e0*
99.4317
99.5636
99.3001
65.4224
720873167207650881
15.9449
hfeng-pmm2SNP*map_l100_m1_e0*
99.5195
99.5580
99.4810
66.0017
720833207207237647
12.5000
dgrover-gatkSNP*map_l100_m1_e0*
99.4999
99.4779
99.5218
66.8041
720253787201434678
22.5434
raldana-dualsentieonSNP*map_l100_m1_e0*
99.3579
99.3895
99.3263
63.6563
719614427195048823
4.7131
hfeng-pmm1SNP*map_l100_m1_e0*
99.5814
99.3868
99.7767
62.8958
719594447194816149
30.4348