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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 181 182 183 184 185 186 187 188 189 ... 1720 1721 » 9201-9250 / 86044 show all
mlin-fermikit	SNP	ti	map_l125_m2_e1	homalt	67.0382	58.2650	78.9219	57.4454	6676	4782	6676	1783	1698	95.2328
hfeng-pmm3	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	het	99.4191	98.9769	99.8654	39.1534	6675	69	6675	9	3	33.3333
asubramanian-gatk	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.1453	98.8584	99.4339	36.2670	6668	77	6675	38	0	0.0000
asubramanian-gatk	SNP	tv	map_l100_m1_e0	het	60.4053	43.3028	99.8355	88.3520	6676	8741	6674	11	2	18.1818
jpowers-varprowl	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	het	98.2384	98.5913	97.8879	54.8387	6649	95	6674	144	10	6.9444
ckim-dragen	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.2901	93.2087	99.5822	26.9805	6629	483	6673	28	28	100.0000
asubramanian-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	95.8458	93.1665	98.6838	27.9872	6626	486	6673	89	86	96.6292
jli-custom	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	*	99.4857	99.1089	99.8653	46.8501	6673	60	6673	9	5	55.5556
ltrigg-rtg2	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	98.4378	97.3195	99.5821	32.8253	6644	183	6672	28	28	100.0000
ltrigg-rtg2	SNP	*	map_l125_m0_e0	homalt	99.6639	99.4041	99.9251	65.7800	6672	40	6672	5	4	80.0000
raldana-dualsentieon	SNP	*	map_l125_m0_e0	homalt	99.6192	99.3892	99.8503	65.6627	6671	41	6671	10	7	70.0000
raldana-dualsentieon	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	het	99.2264	98.9027	99.5522	39.1407	6670	74	6670	30	1	3.3333
rpoplin-dv42	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	95.9098	92.6401	99.4187	25.8018	6646	528	6670	39	38	97.4359
raldana-dualsentieon	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	*	99.4334	99.0346	99.8354	46.3028	6668	65	6670	11	7	63.6364
hfeng-pmm2	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	het	99.3742	98.8879	99.8652	37.8733	6669	75	6669	9	0	0.0000
hfeng-pmm1	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	het	99.3889	98.8731	99.9101	37.5970	6668	76	6668	6	0	0.0000
ltrigg-rtg2	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	*	99.5382	99.2871	99.7905	44.9407	6685	48	6668	14	4	28.5714
egarrison-hhga	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	het	99.2558	98.8879	99.6265	37.2904	6669	75	6668	25	12	48.0000
asubramanian-gatk	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	het	98.8363	98.8582	98.8143	45.0033	6667	77	6667	80	1	1.2500
astatham-gatk	SNP	ti	map_l125_m0_e0	het	89.1339	80.7092	99.5223	81.9410	6669	1594	6667	32	13	40.6250
jpowers-varprowl	SNP	tv	map_l150_m1_e0	het	95.7277	95.9689	95.4878	82.3230	6666	280	6666	315	75	23.8095
qzeng-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	97.8714	98.8734	96.8895	83.9166	6582	75	6666	214	40	18.6916
cchapple-custom	INDEL	I16_PLUS	*	*	97.5144	96.5971	98.4493	68.4041	6160	217	6666	105	85	80.9524
jli-custom	SNP	*	map_l125_m0_e0	homalt	99.5817	99.2998	99.8651	65.5375	6665	47	6665	9	9	100.0000
bgallagher-sentieon	SNP	*	map_l125_m0_e0	homalt	99.5370	99.2849	99.7904	67.2503	6664	48	6664	14	10	71.4286
ckim-dragen	SNP	*	map_l125_m0_e0	homalt	99.4476	99.2253	99.6709	64.2590	6660	52	6663	22	19	86.3636
ckim-gatk	SNP	*	map_l150_m2_e0	homalt	72.5580	56.9536	99.9400	81.6478	6663	5036	6663	4	2	50.0000
ndellapenna-hhga	SNP	*	map_l125_m0_e0	homalt	99.5815	99.2700	99.8951	66.7961	6663	49	6663	7	6	85.7143
asubramanian-gatk	SNP	ti	map_l100_m0_e0	*	46.8392	30.5957	99.8501	90.3797	6661	15110	6661	10	5	50.0000
ndellapenna-hhga	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	het	95.4402	98.1388	92.8860	44.9639	6591	125	6659	510	472	92.5490
anovak-vg	SNP	tv	map_l150_m2_e1	het	76.1119	90.7050	65.5638	81.6339	6665	683	6658	3497	823	23.5345
ndellapenna-hhga	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	het	99.1511	98.7248	99.5812	37.8775	6658	86	6657	28	16	57.1429
qzeng-custom	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.6500	99.6294	99.6706	40.2309	6720	25	6656	22	11	50.0000
astatham-gatk	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	het	99.2913	98.6803	99.9099	43.4022	6655	89	6655	6	1	16.6667
anovak-vg	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	het	81.2064	88.9071	74.7333	41.7707	5971	745	6655	2250	1626	72.2667
gduggal-snapplat	SNP	ti	map_l150_m2_e0	homalt	93.2670	87.4869	99.8649	73.8706	6663	953	6654	9	9	100.0000
gduggal-snapfb	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	67.6742	98.1523	51.6392	81.2351	6534	123	6647	6225	139	2.2329
asubramanian-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	het	99.2900	98.8833	99.7000	54.0745	6641	75	6647	20	7	35.0000
raldana-dualsentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.2736	92.8150	100.0000	26.1913	6601	511	6645	0	0
ckim-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.1495	99.5808	98.7219	57.2055	6651	28	6643	86	83	96.5116
ltrigg-rtg1	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	*	99.2985	98.8415	99.7597	44.6403	6655	78	6641	16	6	37.5000
gduggal-snapplat	SNP	tv	map_l150_m2_e0	het	91.9870	91.5747	92.4029	88.3430	6641	611	6641	546	288	52.7473
astatham-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.0900	99.5359	98.6480	56.8443	6648	31	6640	91	88	96.7033
jli-custom	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	97.4779	95.9039	99.1043	49.4530	6626	283	6639	60	51	85.0000
rpoplin-dv42	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	97.7184	99.3562	96.1338	51.2081	6636	43	6639	267	254	95.1311
dgrover-gatk	SNP	*	map_l125_m0_e0	homalt	99.3639	98.9124	99.8196	67.9886	6639	73	6639	12	8	66.6667
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.0824	99.5209	98.6478	57.7394	6647	32	6639	91	89	97.8022
cchapple-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	93.6937	90.7254	96.8627	52.3369	1976	202	6638	215	185	86.0465
jli-custom	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	98.3153	97.1961	99.4606	33.3866	6621	191	6638	36	35	97.2222
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.0969	99.4760	98.7206	57.2310	6644	35	6636	86	83	96.5116

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