PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
81551-81600 / 86044 show all
ckim-vqsrINDELI16_PLUSdecoyhet
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSdecoyhetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSfunc_cdshetalt
0.0000
100.0000
01000
ckim-vqsrINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
50.0000
100.0000
11000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
100.0000
100.0000
30000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
50.0000
100.0000
11000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m0_e0*
0.0000
0.0000
99.4565
00010
0.0000
ckim-vqsrINDELI16_PLUSmap_l250_m0_e0het
0.0000
0.0000
98.9130
00010
0.0000
ckim-vqsrINDELI16_PLUSmap_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m0_e0homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m1_e0hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m1_e0homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m2_e0hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m2_e0homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m2_e1hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m2_e1homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSsegdupwithalt*
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSsegdupwithalthet
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUStech_badpromotershetalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5decoy*
0.0000
100.0000
00000
ckim-vqsrINDELI1_5decoyhet
0.0000
100.0000
00000
ckim-vqsrINDELI1_5decoyhetalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5decoyhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000