PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1627 1628 1629 1630 1631 1632 1633 1634 1635 ... 1720 1721 » 81501-81550 / 86044 show all
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	*	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	het	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	map_l150_m0_e0	hetalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	map_l150_m0_e0	homalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	map_l150_m1_e0	homalt	0.0000	0.0000	99.2754	0	0	0	1	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	map_l150_m2_e0	homalt	0.0000	0.0000	99.4083	0	0	0	1	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	map_l150_m2_e1	homalt	0.0000	0.0000	99.4220	0	0	0	1	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	map_l250_m0_e0	hetalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	map_l250_m0_e0	homalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	map_l250_m1_e0	homalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	segdupwithalt	*	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	segdupwithalt	het	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	segdupwithalt	hetalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	segdupwithalt	homalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	tech_badpromoters	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	tech_badpromoters	homalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	func_cds	hetalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_gt10	het	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	*	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	het	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	homalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	map_l250_m0_e0	hetalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	segdupwithalt	hetalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	segdupwithalt	homalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	decoy	het	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	decoy	homalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	*	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	het	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m0_e0	hetalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	segdupwithalt	*	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	segdupwithalt	het	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	segdupwithalt	hetalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	segdupwithalt	homalt	0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	decoy	*	0.0000		100.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge