PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1462 1463 1464 1465 1466 1467 1468 1469 1470 ... 1720 1721 » 73251-73300 / 86044 show all
anovak-vg	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l100_m0_e0	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l100_m1_e0	hetalt	0.0000	33.3333	0.0000	0.0000	1	2	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l100_m2_e0	hetalt	0.0000	33.3333	0.0000	0.0000	1	2	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l100_m2_e1	hetalt	0.0000	33.3333	0.0000	0.0000	1	2	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l125_m0_e0	het		0.0000		100.0000	0	3	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l125_m0_e0	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l125_m1_e0	hetalt	0.0000	33.3333	0.0000	0.0000	1	2	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l125_m2_e0	hetalt	0.0000	33.3333	0.0000	0.0000	1	2	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l125_m2_e1	hetalt	0.0000	33.3333	0.0000	0.0000	1	2	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l150_m0_e0	het		0.0000		100.0000	0	2	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l150_m0_e0	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l150_m1_e0	het		0.0000		100.0000	0	6	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l150_m1_e0	hetalt	0.0000	50.0000	0.0000	0.0000	1	1	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l150_m2_e0	het		0.0000		100.0000	0	6	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l150_m2_e0	hetalt	0.0000	50.0000	0.0000	0.0000	1	1	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l150_m2_e1	het		0.0000		100.0000	0	6	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l150_m2_e1	hetalt	0.0000	50.0000	0.0000	0.0000	1	1	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l250_m0_e0	*		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l250_m0_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l250_m0_e0	homalt		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l250_m1_e0	*		0.0000	0.0000	88.8889	0	1	0	1	1	100.0000
anovak-vg	INDEL	I16_PLUS	map_l250_m1_e0	het		0.0000		100.0000	0	1	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l250_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l250_m1_e0	homalt		0.0000	0.0000	83.3333	0	0	0	1	1	100.0000
anovak-vg	INDEL	I16_PLUS	map_l250_m2_e0	*		0.0000	0.0000	90.9091	0	1	0	1	1	100.0000
anovak-vg	INDEL	I16_PLUS	map_l250_m2_e0	het		0.0000		100.0000	0	1	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l250_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l250_m2_e0	homalt		0.0000	0.0000	87.5000	0	0	0	1	1	100.0000
anovak-vg	INDEL	I16_PLUS	map_l250_m2_e1	*		0.0000	0.0000	90.9091	0	1	0	1	1	100.0000
anovak-vg	INDEL	I16_PLUS	map_l250_m2_e1	het		0.0000		100.0000	0	1	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	I16_PLUS	map_l250_m2_e1	homalt		0.0000	0.0000	87.5000	0	0	0	1	1	100.0000
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_homopolymer_gt10	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_11to50	*		0.0000	0.0000	0.0000	0	1	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_11to50	het		0.0000	0.0000	0.0000	0	1	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_51to200	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_51to200	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge