PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1367 1368 1369 1370 1371 1372 1373 1374 1375 ... 1720 1721 » 68501-68550 / 86044 show all
cchapple-custom	SNP	ti	func_cds	hetalt	0.0000	100.0000	0.0000	0.0000	8	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	83.3333	0.0000	0.0000	5	1	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	0.0000	100.0000	0.0000	0.0000	12	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	2	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	0.0000	100.0000	0.0000	0.0000	12	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	0.0000	100.0000	0.0000	0.0000	2	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	*		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_triTR_gt200	*		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_triTR_gt200	het		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_triTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_triTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	map_l100_m0_e0	hetalt	0.0000	100.0000	0.0000	0.0000	14	0	0	0	0
cchapple-custom	SNP	ti	map_l100_m1_e0	hetalt	0.0000	100.0000	0.0000	0.0000	29	0	0	0	0
cchapple-custom	SNP	ti	map_l100_m2_e0	hetalt	0.0000	100.0000	0.0000	0.0000	30	0	0	0	0
cchapple-custom	SNP	ti	map_l100_m2_e1	hetalt	0.0000	100.0000	0.0000	0.0000	31	0	0	0	0
cchapple-custom	SNP	ti	map_l125_m0_e0	hetalt	0.0000	100.0000	0.0000	0.0000	8	0	0	0	0
cchapple-custom	SNP	ti	map_l125_m1_e0	hetalt	0.0000	100.0000	0.0000	0.0000	24	0	0	0	0
cchapple-custom	SNP	ti	map_l125_m2_e0	hetalt	0.0000	100.0000	0.0000	0.0000	24	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge