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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 127 128 129 130 131 132 133 134 135 ... 1720 1721 » 6501-6550 / 86044 show all
ghariani-varprowl	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	98.2430	99.5309	96.9881	59.7341	11032	52	11045	343	3	0.8746
qzeng-custom	INDEL	D1_5	HG002compoundhet	het	92.9212	93.9236	91.9400	64.3165	1623	105	11042	968	705	72.8306
mlin-fermikit	SNP	*	func_cds	het	99.3878	98.9159	99.8643	18.4193	11040	121	11040	15	0	0.0000
ndellapenna-hhga	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.7605	99.6030	99.9185	55.4188	11040	44	11040	9	6	66.6667
anovak-vg	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	97.5583	98.0061	97.1145	57.2508	10863	221	11039	328	130	39.6341
ckim-gatk	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	het	99.5405	99.5949	99.4862	63.6798	11063	45	11037	57	16	28.0702
bgallagher-sentieon	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	het	99.5180	99.5769	99.4593	62.5780	11061	47	11036	60	22	36.6667
dgrover-gatk	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	het	99.5450	99.5769	99.5131	63.1488	11061	47	11036	54	17	31.4815
gduggal-snapvard	SNP	*	map_l150_m2_e0	homalt	97.6688	95.7005	99.7199	73.1870	11196	503	11035	31	25	80.6452
hfeng-pmm3	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.7876	99.5850	99.9909	55.4353	11038	46	11035	1	0	0.0000
hfeng-pmm1	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.7830	99.5760	99.9909	55.2895	11037	47	11034	1	0	0.0000
eyeh-varpipe	SNP	*	func_cds	het	97.1259	99.9642	94.4444	28.6508	11157	4	11033	649	1	0.1541
raldana-dualsentieon	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.7559	99.5579	99.9547	55.7919	11035	49	11032	5	2	40.0000
gduggal-bwafb	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	97.3336	95.4207	99.3247	69.8100	11023	529	11031	75	43	57.3333
gduggal-bwafb	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	97.3336	95.4207	99.3247	69.8100	11023	529	11031	75	43	57.3333
gduggal-bwavard	SNP	ti	map_l125_m2_e1	homalt	98.6250	97.3905	99.8913	68.5234	11159	299	11030	12	9	75.0000
astatham-gatk	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	het	99.5583	99.5229	99.5937	62.9090	11055	53	11030	45	18	40.0000
anovak-vg	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	*	97.6411	98.1762	97.1119	60.4037	10712	199	11029	328	130	39.6341
hfeng-pmm2	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.7378	99.5218	99.9547	55.5264	11031	53	11028	5	1	20.0000
hfeng-pmm2	SNP	ti	map_l125_m1_e0	homalt	99.8234	99.8189	99.8280	66.1185	11025	20	11025	19	9	47.3684
hfeng-pmm3	SNP	ti	map_l125_m1_e0	homalt	99.8144	99.7918	99.8370	66.0308	11022	23	11022	18	8	44.4444
hfeng-pmm1	SNP	ti	map_l125_m1_e0	homalt	99.8143	99.7827	99.8460	66.1307	11021	24	11021	17	7	41.1765
ckim-vqsr	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	het	99.5715	99.4508	99.6924	63.7612	11047	61	11021	34	16	47.0588
ckim-isaac	SNP	ti	map_l150_m1_e0	*	71.6515	55.9050	99.7466	75.8793	11020	8692	11020	28	5	17.8571
gduggal-snapvard	SNP	*	func_cds	het	99.2494	99.0323	99.4675	33.3113	11053	108	11020	59	21	35.5932
gduggal-bwavard	SNP	*	func_cds	het	99.2091	99.0055	99.4135	34.5015	11050	111	11018	65	23	35.3846
bgallagher-sentieon	SNP	tv	map_l100_m0_e0	*	98.9757	99.3865	98.5682	71.0162	11016	68	11015	160	25	15.6250
hfeng-pmm3	SNP	tv	map_l100_m0_e0	*	99.4268	99.3775	99.4762	69.0933	11015	69	11014	58	8	13.7931
egarrison-hhga	SNP	ti	map_l125_m1_e0	homalt	99.8187	99.7103	99.9274	66.0474	11013	32	11013	8	8	100.0000
hfeng-pmm2	SNP	tv	map_l100_m0_e0	*	99.1581	99.3594	98.9576	71.7097	11013	71	11012	116	15	12.9310
ckim-dragen	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	het	99.5579	99.4508	99.6651	63.3945	11047	61	11012	37	16	43.2432
cchapple-custom	SNP	tv	map_l150_m2_e0	*	96.3013	97.0233	95.5899	79.4079	11017	338	11011	508	83	16.3386
ckim-vqsr	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.6562	99.3685	99.9455	58.6114	11014	70	11010	6	4	66.6667
eyeh-varpipe	SNP	tv	map_l100_m0_e0	*	96.1232	99.6842	92.8078	73.2654	11049	35	11007	853	14	1.6413
ckim-isaac	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	98.6735	97.4593	99.9183	53.0977	11009	287	11006	9	4	44.4444
ndellapenna-hhga	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	het	95.1353	97.1012	93.2475	55.2934	10786	322	11006	797	695	87.2020
anovak-vg	SNP	*	map_l125_m0_e0	het	76.4858	87.7448	67.7876	82.7028	11112	1552	11006	5230	1427	27.2849
anovak-vg	SNP	ti	map_l150_m1_e0	het	75.5864	89.6281	65.3485	80.5450	11087	1283	11006	5836	1295	22.1899
qzeng-custom	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.6338	99.4406	99.8276	58.0012	11022	62	11004	19	1	5.2632
jmaeng-gatk	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	het	99.4180	99.2798	99.5566	63.6361	11028	80	11002	49	18	36.7347
ltrigg-rtg1	SNP	ti	map_l125_m1_e0	homalt	99.7461	99.6016	99.8910	65.4505	11001	44	11001	12	12	100.0000
raldana-dualsentieon	SNP	ti	map_l125_m1_e0	homalt	99.7597	99.6016	99.9183	62.2389	11001	44	11001	9	8	88.8889
egarrison-hhga	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	het	95.1518	97.8124	92.6322	56.2191	10865	243	11001	875	754	86.1714
jli-custom	SNP	ti	map_l125_m1_e0	homalt	99.7551	99.5835	99.9273	62.3216	10999	46	10999	8	8	100.0000
bgallagher-sentieon	SNP	ti	map_l125_m1_e0	homalt	99.7370	99.5745	99.9001	63.0037	10998	47	10998	11	9	81.8182
hfeng-pmm1	SNP	tv	map_l100_m0_e0	*	99.3900	99.2241	99.5564	68.9143	10998	86	10997	49	15	30.6122
ndellapenna-hhga	SNP	ti	map_l125_m1_e0	homalt	99.7415	99.5473	99.9364	64.8588	10995	50	10995	7	7	100.0000
jpowers-varprowl	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.3222	99.1249	99.5202	58.6425	10987	97	10994	53	8	15.0943
gduggal-snapfb	SNP	ti	map_l125_m2_e1	homalt	97.8156	95.9417	99.7641	75.2443	10993	465	10994	26	14	53.8462
ltrigg-rtg2	SNP	ti	map_l125_m1_e0	homalt	99.7369	99.5292	99.9454	62.9489	10993	52	10993	6	6	100.0000

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