PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1296 1297 1298 1299 1300 1301 1302 1303 1304 ... 1720 1721 » 64951-65000 / 86044 show all
jpowers-varprowl	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	0.7747	0.0000	0.0000	46	5892	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	0.0000	0.5767	0.0000	0.0000	34	5862	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	84	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	1	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	1.7857	0.0000	0.0000	2	110	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	0.0000	3.3333	0.0000	0.0000	2	58	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	0.0000	0.9494	0.0000	0.0000	6	626	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	0.0000	0.3228	0.0000	0.0000	15	4632	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	0.2234	0.0000	0.0000	9	4020	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	0.0000	0.3562	0.0000	0.0000	17	4755	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	0.0000	0.5767	0.0000	0.0000	34	5862	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	0.5782	0.0000	0.0000	22	3783	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	0.0000	0	179	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000	0.0000	92.3077	0	0	0	1	1	100.0000
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	0.0000	0.3165	0.0000	0.0000	1	315	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	*		0.0000		100.0000	0	1	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	0.0000	1.4147	0.0000	0.0000	16	1115	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	0.0000	0.4608	0.0000	0.0000	1	216	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	0.0000	1.2780	0.0000	0.0000	4	309	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	23	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000	0.0000	50.0000	0	0	0	2	1	50.0000
jpowers-varprowl	INDEL	I1_5	map_l100_m0_e0	hetalt		0.0000	0.0000	0.0000	0	9	0	0	0
jpowers-varprowl	INDEL	I1_5	map_l100_m1_e0	hetalt		0.0000	0.0000	0.0000	0	44	0	0	0
jpowers-varprowl	INDEL	I1_5	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	44	0	0	0
jpowers-varprowl	INDEL	I1_5	map_l100_m2_e1	hetalt		0.0000	0.0000	0.0000	0	45	0	0	0
jpowers-varprowl	INDEL	I1_5	map_l125_m0_e0	hetalt		0.0000	0.0000	0.0000	0	4	0	0	0
jpowers-varprowl	INDEL	I1_5	map_l125_m1_e0	hetalt		0.0000	0.0000	0.0000	0	17	0	0	0
jpowers-varprowl	INDEL	I1_5	map_l125_m2_e0	hetalt		0.0000	0.0000	0.0000	0	19	0	0	0
jpowers-varprowl	INDEL	I1_5	map_l125_m2_e1	hetalt		0.0000	0.0000	0.0000	0	19	0	0	0
jpowers-varprowl	INDEL	I1_5	map_l150_m0_e0	hetalt		0.0000	0.0000	0.0000	0	3	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge