PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
64401-64450 / 86044 show all
jmaeng-gatkSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
jmaeng-gatkSNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkSNPtimap_l250_m0_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkSNPtimap_l250_m1_e0hetalt
0.0000
100.0000
04000
ltrigg-rtg1INDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDEL*segdupwithalthetalt
0.0000
100.0000
00000
ltrigg-rtg1INDEL*segdupwithalthomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
93.3333
00011
100.0000
ltrigg-rtg1INDELC16_PLUSdecoy*
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSdecoyhet
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSdecoyhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSdecoyhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSfunc_cds*
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSfunc_cdshet
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC16_PLUSfunc_cdshomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
0.0000
96.6667
00010
0.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
0.0000
0.0000
98.1132
00010
0.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSmap_l100_m0_e0*
0.0000
100.0000
00000
ltrigg-rtg1INDELC16_PLUSmap_l100_m0_e0het
0.0000
100.0000
00000