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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 124 125 126 127 128 129 130 131 132 ... 1720 1721 » 6351-6400 / 86044 show all
raldana-dualsentieon	INDEL	I1_5	HG002compoundhet	*	94.0016	91.1217	97.0695	64.7141	11259	1097	11262	340	339	99.7059
hfeng-pmm3	INDEL	D6_15	*	het	98.2130	97.5673	98.8673	58.6531	11310	282	11260	129	115	89.1473
egarrison-hhga	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.6460	99.6990	99.5931	55.9882	11262	34	11258	46	37	80.4348
gduggal-bwafb	SNP	ti	map_l125_m2_e0	homalt	99.5006	99.1196	99.8847	69.9640	11258	100	11258	13	7	53.8462
ckim-isaac	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	92.5569	94.9365	90.2936	47.5778	11887	634	11256	1210	1034	85.4545
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	het	81.3693	71.3832	94.6037	70.0040	11250	4510	11255	642	179	27.8816
dgrover-gatk	SNP	tv	map_l150_m2_e0	*	99.0452	99.1281	98.9624	78.7121	11256	99	11254	118	24	20.3390
gduggal-bwaplat	SNP	ti	map_l150_m2_e1	*	70.2141	54.2827	99.3818	90.4903	11249	9474	11253	70	25	35.7143
astatham-gatk	SNP	ti	map_l125_m2_e0	homalt	99.4872	99.0755	99.9023	65.7910	11253	105	11253	11	10	90.9091
hfeng-pmm1	SNP	tv	map_l150_m2_e0	*	99.3292	99.1193	99.5400	75.2398	11255	100	11253	52	14	26.9231
ndellapenna-hhga	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.6018	99.6636	99.5400	55.7604	11258	38	11253	52	41	78.8462
raldana-dualsentieon	INDEL	D6_15	*	het	97.8785	97.4810	98.2792	59.3884	11300	292	11251	197	187	94.9239
gduggal-bwavard	SNP	*	map_l150_m2_e0	homalt	98.6803	97.5639	99.8226	73.2845	11414	285	11251	20	15	75.0000
raldana-dualsentieon	SNP	tv	map_l150_m2_e0	*	99.0273	99.0841	98.9706	75.8842	11251	104	11249	117	3	2.5641
cchapple-custom	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.8050	99.7787	99.8314	54.7146	11271	25	11248	19	17	89.4737
hfeng-pmm2	SNP	*	map_l150_m1_e0	homalt	99.7650	99.7782	99.7517	71.3283	11248	25	11248	28	11	39.2857
egarrison-hhga	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	*	94.8171	94.6358	94.9992	46.8433	11238	637	11246	592	535	90.3716
hfeng-pmm1	SNP	*	map_l150_m1_e0	homalt	99.7516	99.7427	99.7604	71.3075	11244	29	11244	27	10	37.0370
hfeng-pmm2	INDEL	D6_15	*	het	98.1073	97.3775	98.8481	59.1502	11288	304	11242	131	113	86.2595
hfeng-pmm3	SNP	*	map_l150_m1_e0	homalt	99.7427	99.7250	99.7604	71.2100	11242	31	11242	27	10	37.0370
gduggal-bwavard	SNP	tv	map_l150_m2_e1	*	94.1240	97.9830	90.5575	83.2923	11270	232	11240	1172	51	4.3515
ciseli-custom	SNP	*	HG002compoundhet	het	65.9081	78.7276	56.6789	49.8597	11162	3016	11240	8591	230	2.6772
gduggal-snapfb	SNP	*	map_l150_m2_e1	homalt	97.2353	95.0114	99.5658	80.8094	11237	590	11237	49	20	40.8163
gduggal-bwafb	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.5570	99.4777	99.6364	55.6678	11237	59	11234	41	40	97.5610
ltrigg-rtg1	SNP	*	map_l150_m1_e0	homalt	99.7513	99.6186	99.8844	70.3814	11230	43	11232	13	13	100.0000
egarrison-hhga	SNP	*	map_l150_m1_e0	homalt	99.7690	99.6274	99.9110	70.9129	11231	42	11231	10	10	100.0000
ckim-dragen	SNP	tv	map_l150_m2_e0	*	98.2503	98.9080	97.6013	79.0121	11231	124	11230	276	27	9.7826
ltrigg-rtg2	SNP	tv	map_l150_m2_e1	*	98.6899	97.5830	99.8222	64.8925	11224	278	11226	20	2	10.0000
gduggal-bwaplat	SNP	*	map_l150_m1_e0	het	73.2588	58.0710	99.2046	91.8292	11217	8099	11225	90	26	28.8889
egarrison-hhga	SNP	tv	map_l150_m2_e0	*	99.2922	98.8287	99.7600	74.2574	11222	133	11222	27	12	44.4444
jli-custom	SNP	tv	map_l150_m2_e0	*	99.0817	98.8287	99.3360	73.0560	11222	133	11221	75	23	30.6667
ltrigg-rtg2	SNP	*	map_l150_m1_e0	homalt	99.7245	99.5210	99.9288	67.8086	11219	54	11221	8	7	87.5000
rpoplin-dv42	SNP	tv	map_l150_m2_e0	*	98.9506	98.8287	99.0728	74.8529	11222	133	11220	105	61	58.0952
ltrigg-rtg1	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.7960	99.6105	99.9822	54.2557	11252	44	11220	2	2	100.0000
raldana-dualsentieon	SNP	*	map_l150_m1_e0	homalt	99.7067	99.5121	99.9020	67.3803	11218	55	11218	11	8	72.7273
bgallagher-sentieon	SNP	*	map_l150_m1_e0	homalt	99.6712	99.4855	99.8575	68.3134	11215	58	11215	16	12	75.0000
jli-custom	SNP	*	map_l150_m1_e0	homalt	99.6978	99.4855	99.9109	67.4251	11215	58	11215	10	10	100.0000
rpoplin-dv42	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	98.5109	97.6402	99.3972	56.5597	11213	271	11213	68	60	88.2353
ndellapenna-hhga	SNP	*	map_l150_m1_e0	homalt	99.6799	99.4589	99.9020	69.8014	11212	61	11212	11	10	90.9091
qzeng-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	89.9539	95.3891	85.1048	47.7198	4241	205	11210	1962	925	47.1458
ckim-isaac	SNP	ti	map_l100_m2_e1	homalt	75.4653	60.6143	99.9554	56.7172	11210	7284	11210	5	5	100.0000
ndellapenna-hhga	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	*	94.7857	94.3579	95.2175	45.4647	11205	670	11209	563	510	90.5861
ltrigg-rtg2	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.7471	99.5042	99.9911	53.7923	11240	56	11209	1	1	100.0000
eyeh-varpipe	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	97.2328	95.1446	99.4146	48.4901	921	47	11209	66	66	100.0000
jlack-gatk	SNP	tv	map_l150_m2_e0	*	94.5181	98.7142	90.6642	84.3431	11209	146	11207	1154	67	5.8059
eyeh-varpipe	SNP	*	map_l100_m0_e0	homalt	99.8121	99.7935	99.8307	65.9910	11596	24	11205	19	8	42.1053
jpowers-varprowl	SNP	ti	map_l125_m2_e0	homalt	99.2383	98.6529	99.8307	70.9546	11205	153	11205	19	15	78.9474
ghariani-varprowl	SNP	ti	map_l125_m2_e0	homalt	99.2250	98.6353	99.8218	69.1124	11203	155	11203	20	15	75.0000
gduggal-bwafb	SNP	tv	map_l150_m2_e0	*	98.5004	98.6262	98.3749	78.4095	11199	156	11199	185	38	20.5405
asubramanian-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.4262	96.9096	99.9911	63.7599	11195	357	11199	1	1	100.0000

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