PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
63551-63600 / 86044 show all
jpowers-varprowlINDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD16_PLUStech_badpromotershomalt
0.0000
100.0000
00000
jpowers-varprowlINDELD1_5*hetalt
0.0000
0.5076
0.0000
0.0000
5210193000
jpowers-varprowlINDELD1_5HG002complexvarhetalt
0.0000
1.9970
0.0000
0.0000
271325000
jpowers-varprowlINDELD1_5HG002compoundhethetalt
0.0000
0.4992
0.0000
0.0000
5110165000
jpowers-varprowlINDELD1_5decoyhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELD1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.2744
0.0000
0.0000
51817000
jpowers-varprowlINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.5379
0.0000
0.0000
509246000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.4843
0.0000
0.0000
459246000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
1.4493
0.0000
0.0000
168000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
1.3514
0.0000
0.0000
173000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
2.7027
0.0000
0.0000
136000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.2324
0.0000
0.0000
31288000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.4818
0.0000
0.0000
398056000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.5273
0.0000
0.0000
366791000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.4772
0.0000
0.0000
398134000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.4843
0.0000
0.0000
459246000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.6099
0.0000
0.0000
426844000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
0491000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.4866
0.0000
0.0000
2409000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
01000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.4689
0.0000
0.0000
71486000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.1538
0.0000
0.0000
1649000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.4329
0.0000
0.0000
2460000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
049000
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
013000
jpowers-varprowlINDELD1_5map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
014000
jpowers-varprowlINDELD1_5map_l100_m1_e0hetalt
0.0000
0.0000
0.0000
047000
jpowers-varprowlINDELD1_5map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
048000
jpowers-varprowlINDELD1_5map_l100_m2_e1hetalt
0.0000
1.9608
0.0000
0.0000
150000
jpowers-varprowlINDELD1_5map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELD1_5map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
013000
jpowers-varprowlINDELD1_5map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
015000
jpowers-varprowlINDELD1_5map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
015000