PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
63551-63600 / 86044 show all | |||||||||||||||
jpowers-varprowl | INDEL | D16_PLUS | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D16_PLUS | tech_badpromoters | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
jpowers-varprowl | INDEL | D1_5 | * | hetalt | 0.0000 | 0.5076 | 0.0000 | 0.0000 | 52 | 10193 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | HG002complexvar | hetalt | 0.0000 | 1.9970 | 0.0000 | 0.0000 | 27 | 1325 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | HG002compoundhet | hetalt | 0.0000 | 0.4992 | 0.0000 | 0.0000 | 51 | 10165 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | decoy | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | func_cds | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | lowcmp_AllRepeats_51to200bp_gt95identity_merged | hetalt | 0.0000 | 0.2744 | 0.0000 | 0.0000 | 5 | 1817 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | lowcmp_AllRepeats_lt51bp_gt95identity_merged | hetalt | 0.0000 | 0.5379 | 0.0000 | 0.0000 | 50 | 9246 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331 | hetalt | 0.0000 | 0.4843 | 0.0000 | 0.0000 | 45 | 9246 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged | hetalt | 0.0000 | 1.4493 | 0.0000 | 0.0000 | 1 | 68 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | hetalt | 0.0000 | 1.3514 | 0.0000 | 0.0000 | 1 | 73 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | hetalt | 0.0000 | 2.7027 | 0.0000 | 0.0000 | 1 | 36 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged | hetalt | 0.0000 | 0.2324 | 0.0000 | 0.0000 | 3 | 1288 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
jpowers-varprowl | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged | hetalt | 0.0000 | 0.4818 | 0.0000 | 0.0000 | 39 | 8056 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged | hetalt | 0.0000 | 0.5273 | 0.0000 | 0.0000 | 36 | 6791 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged | hetalt | 0.0000 | 0.4772 | 0.0000 | 0.0000 | 39 | 8134 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged | hetalt | 0.0000 | 0.4843 | 0.0000 | 0.0000 | 45 | 9246 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 0.0000 | 0.6099 | 0.0000 | 0.0000 | 42 | 6844 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 491 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_gt200 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_gt200 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_homopolymer_6to10 | hetalt | 0.0000 | 0.4866 | 0.0000 | 0.0000 | 2 | 409 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_quadTR_11to50 | hetalt | 0.0000 | 0.4689 | 0.0000 | 0.0000 | 7 | 1486 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_quadTR_51to200 | hetalt | 0.0000 | 0.1538 | 0.0000 | 0.0000 | 1 | 649 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_quadTR_gt200 | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_quadTR_gt200 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_quadTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_quadTR_gt200 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_triTR_11to50 | hetalt | 0.0000 | 0.4329 | 0.0000 | 0.0000 | 2 | 460 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_triTR_51to200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 49 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 0.0000 | 100.0000 | 0 | 13 | 0 | 0 | 0 | ||||
jpowers-varprowl | INDEL | D1_5 | map_l100_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 14 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | map_l100_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 47 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | map_l100_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 48 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | map_l100_m2_e1 | hetalt | 0.0000 | 1.9608 | 0.0000 | 0.0000 | 1 | 50 | 0 | 0 | 0 | ||
jpowers-varprowl | INDEL | D1_5 | map_l125_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 3 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | map_l125_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 13 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | map_l125_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 15 | 0 | 0 | 0 | |||
jpowers-varprowl | INDEL | D1_5 | map_l125_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 15 | 0 | 0 | 0 |