PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TP Query FPFP gt% FP ma
62501-62550 / 86044 show all
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
01000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
01000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5tech_badpromotershetalt
0.0000
50.0000
0.0000
0.0000
11000
gduggal-snapfbINDELD6_15decoyhetalt
100.0000
100.0000
10000
gduggal-snapfbINDELD6_15decoyhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELD6_15func_cdshetalt
0.0000
50.0000
0.0000
0.0000
11000
gduggal-snapfbINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
02000
gduggal-snapfbINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
02000
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
02000
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
01000
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
01000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15map_l125_m0_e0hetalt
66.6667
100.0000
42000
gduggal-snapfbINDELD6_15map_l150_m0_e0hetalt
80.0000
100.0000
41000
gduggal-snapfbINDELD6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD6_15map_l250_m1_e0hetalt
0.0000
100.0000
02000
gduggal-snapfbINDELD6_15map_l250_m2_e0hetalt
0.0000
100.0000
02000
gduggal-snapfbINDELD6_15map_l250_m2_e1hetalt
0.0000
100.0000
02000
gduggal-snapfbINDELD6_15segdupwithalt*
0.0000
100.0000
00000
gduggal-snapfbINDELD6_15segdupwithalthet
0.0000
100.0000
00000
gduggal-snapfbINDELD6_15segdupwithalthetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
gduggal-snapfbINDELD6_15tech_badpromotershetalt
0.0000
100.0000
0.0000
0.0000
10000
gduggal-snapfbINDELI16_PLUS**
0.0000
0.0314
0.0000
0.0000
26375000
gduggal-snapfbINDELI16_PLUS*het
0.0000
0.0736
0.0000
0.0000
22716000
gduggal-snapfbINDELI16_PLUS*hetalt
0.0000
0.0000
0.0000
02098000
gduggal-snapfbINDELI16_PLUS*homalt
0.0000
0.0000
0.0000
01561000
gduggal-snapfbINDELI16_PLUSHG002complexvar*
0.0000
0.1528
0.0000
0.0000
21307000
gduggal-snapfbINDELI16_PLUSHG002complexvarhet
0.0000
0.3008
0.0000
0.0000
2663000
gduggal-snapfbINDELI16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
0335000
gduggal-snapfbINDELI16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
0309000